rs12521868

Orientation

plus

Stabilized

plus

Make rs12521868(G;G)

Make rs12521868(G;T)

Make rs12521868(T;T)

Reference

GRCh38 38.1/141

Chromosome

5

Position

132448701

Gene

C5orf56

is a	snp
is	mentioned by
dbSNP	rs12521868
dbSNP (classic)	rs12521868
ClinGen	rs12521868
ebi	rs12521868
HLI	rs12521868
Exac	rs12521868
Gnomad	rs12521868
Varsome	rs12521868
LitVar	rs12521868
Map	rs12521868
PheGenI	rs12521868
Biobank	rs12521868
1000 genomes	rs12521868
hgdp	rs12521868
ensembl	rs12521868
geneview	rs12521868
scholar	rs12521868
google	rs12521868
pharmgkb	rs12521868
gwascentral	rs12521868
openSNP	rs12521868
23andMe	rs12521868
SNPshot	rs12521868
SNPdbe	rs12521868
MSV3d	rs12521868
GWAS Ctlg	rs12521868

GMAF

0.1896

Max Magnitude

0

?	(G;G) (G;T) (T;T)	28

OMIM	606348
Desc	INFLAMMATORY BOWEL DISEASE 5; IBD5
Variant
Related	also

[PMID 19581171] Identification of Las2, a major modifier gene affecting the Pas1 mouse lung tumor susceptibility locus

[PMID 21079743] Interaction of Crohn's Disease Susceptibility Genes in an Australian Paediatric Cohort

GWAS snp
PMID	[PMID 21102463]
Trait
Title	Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci
Risk Allele	T
P-val	1E-20
Odds Ratio	1.2300 [1.18-1.28]

[PMID 17213842] Refined genomic localization and ethnic differences observed for the IBD5 association with Crohn's disease.

[PMID 17667713] Analysis of candidate genes on chromosomes 5q and 19p in celiac disease.

[PMID 19214536] IGR2096a_1 T and IGR2198a_1 C alleles on IBD5 locus of chromosome 5q31 region confer risk for Crohn's disease in Hungarian patients.

[PMID 20066736] Interaction of the major inflammatory bowel disease susceptibility alleles in Crohn's disease patients.

[PMID 24415875] Susceptibility to ulcerative colitis in Hungarian patients determined by gene-gene interactions

[PMID 22908971] Association between inflammatory bowel disease gene 5 (IBD5) and interleukin-23 receptor (IL23R) genetic polymorphisms in Malaysian patients with Crohn's disease.