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rs137852330

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(C;C) 0 common in clinvar
(C;T) 3 Carrier of G6PD deficiency mutation; variable expressivity
(T;T) 5 G6PD deficiency
ReferenceGRCh38 38.1/141
ChromosomeX
Position154534390
GeneG6PD
is asnp
is mentioned by
dbSNPrs137852330
dbSNP (classic)rs137852330
ClinGenrs137852330
ebirs137852330
HLIrs137852330
Exacrs137852330
Gnomadrs137852330
Varsomers137852330
LitVarrs137852330
Maprs137852330
PheGenIrs137852330
Biobankrs137852330
1000 genomesrs137852330
hgdprs137852330
ensemblrs137852330
geneviewrs137852330
scholarrs137852330
googlers137852330
pharmgkbrs137852330
gwascentralrs137852330
openSNPrs137852330
23andMers137852330
SNPshotrs137852330
SNPdbers137852330
MSV3drs137852330
GWAS Ctlgrs137852330
Max Magnitude5

Known as G6PD Coimbra and also as Arg198Cys or R198C, rs137852330 represents a variant in the G6PD gene, located on the X chromosome. On its own, the minor allele of this SNP has been reported to be similar to G6PD Mediterranean, in a patient who exhibited favism (i.e. hemolytic anemia after a specific trigger, such as aspirin or eating fava beans), according to citations in OMIM.

This variant has also been described as one of three variants defining a unique null G6PD allele in a patient with chronic granuloma and hemolytic anemia. The three changes defining this allele were c.317C>G, c.544C>T, and c.592C>T, leading to protein changes Ser106Cys, Arg182Trp and Arg198Cys, represented by SNPs rs267606835, rs267606836 and rs137852330, respectively. It is not known if these other changes would be pathogenic on their own.


23andMe name: i5008440

OMIM305900
Desc
Variant0031
Relatedalso
ClinVar
Risk Rs137852330(T;T)
Alt Rs137852330(T;T)
Reference Rs137852330(C;C)
Significance Other
Disease G6PD COIMBRA Chronic granuloma and hemolytic anemia
Variation info
Gene G6PD
CLNDBN G6PD COIMBRA Chronic granuloma and hemolytic anemia
Reversed 1
HGVS NC_000023.10:g.153762605G>A
CLNSRC OMIM Allelic Variant
CLNACC RCV000011126.1, RCV000011127.4,