rs16139
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| Make rs16139(A;G) |
| Make rs16139(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 24285260 |
| Gene | LOC107986777, NPY |
| is a | snp |
| is | mentioned by |
| dbSNP | rs16139 |
| dbSNP (classic) | rs16139 |
| ClinGen | rs16139 |
| ebi | rs16139 |
| HLI | rs16139 |
| Exac | rs16139 |
| Gnomad | rs16139 |
| Varsome | rs16139 |
| LitVar | rs16139 |
| Map | rs16139 |
| PheGenI | rs16139 |
| Biobank | rs16139 |
| 1000 genomes | rs16139 |
| hgdp | rs16139 |
| ensembl | rs16139 |
| geneview | rs16139 |
| scholar | rs16139 |
| rs16139 | |
| pharmgkb | rs16139 |
| gwascentral | rs16139 |
| openSNP | rs16139 |
| 23andMe | rs16139 |
| SNPshot | rs16139 |
| SNPdbe | rs16139 |
| MSV3d | rs16139 |
| GWAS Ctlg | rs16139 |
| GMAF | 0.01745 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| ClinVar | |
|---|---|
| Risk | rs16139(G;G) rs16139(T;T) |
| Alt | rs16139(G;G) rs16139(T;T) |
| Reference | Rs16139(A;A) |
| Significance | Non-pathogenic |
| Disease | NEUROPEPTIDE Y POLYMORPHISM |
| Variation | info |
| Gene | NPY |
| CLNDBN | NEUROPEPTIDE Y POLYMORPHISM |
| Reversed | 1 |
| HGVS | NC_000007.13:g.24324879T>C |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000015068.2, |
[PMID 17357083
] Medical sequencing at the extremes of human body mass.
[PMID 18385673] Genetic variation in human NPY expression affects stress response and emotion.
[PMID 18828811] Neuropeptide Y receptor genes are associated with alcohol dependence, alcohol withdrawal phenotypes, and cocaine dependence.
[PMID 19119412] Neuropeptide Y gene polymorphisms confer risk of early-onset atherosclerosis.
[PMID 19470168] NPAS2 and PER2 are linked to risk factors of the metabolic syndrome.
[PMID 19587357] A systematic meta-analysis of genetic association studies for diabetic retinopathy.
[PMID 20180986] CLOCK is suggested to associate with comorbid alcohol use and depressive disorders.
[PMID 20351714] Poor replication of candidate genes for major depressive disorder using genome-wide association data.
[PMID 22290120] The evolutionary significance of depression in Pathogen Host Defense (PATHOS-D).
[PMID 23122776] Neuropeptide Y polymorphism increases the risk for asthma in overweight subjects; protection from atherosclerosis in asthmatic subjects--the cardiovascular risk in young Finns study.
[PMID 25221996] Association of Neuropeptide Y (NPY), Interleukin-1B (IL1B) Genetic Variants and Correlation of IL1B Transcript Levels with Vitiligo Susceptibility
[PMID 27559040] Association study of two functional single nucleotide polymorphisms of neuropeptide y gene with multiple sclerosis.
