rs17001266
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (-;-) | 2 | 1.58x increased risk for schizophrenia in males |
| (-;C) | 2 | 1.58x increased risk for schizophrenia in males |
| (C;C) | 0 | normal |
| Reference | GRCh38 38.1/141 |
| Chromosome | 22 |
| Position | 39520625 |
| Gene | ATF4 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17001266 |
| dbSNP (classic) | rs17001266 |
| ClinGen | rs17001266 |
| ebi | rs17001266 |
| HLI | rs17001266 |
| Exac | rs17001266 |
| Gnomad | rs17001266 |
| Varsome | rs17001266 |
| LitVar | rs17001266 |
| Map | rs17001266 |
| PheGenI | rs17001266 |
| Biobank | rs17001266 |
| 1000 genomes | rs17001266 |
| hgdp | rs17001266 |
| ensembl | rs17001266 |
| geneview | rs17001266 |
| scholar | rs17001266 |
| rs17001266 | |
| pharmgkb | rs17001266 |
| gwascentral | rs17001266 |
| openSNP | rs17001266 |
| 23andMe | rs17001266 |
| SNPshot | rs17001266 |
| SNPdbe | rs17001266 |
| MSV3d | rs17001266 |
| GWAS Ctlg | rs17001266 |
| GMAF | 0.2555 |
| Max Magnitude | 2 |
This SNP is on its own, as well as part of a specific haplotype, associated with an overall higher risk for schizophrenia in males based on a study of 352 Chinese patients (186 males). The reported odds ratio (for males only) is 1.58 (CI: 1.07-2.33, p=0.021).[PMID 18163433]
