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rs279836

From SNPedia

Orientationplus
Stabilizedplus
Make rs279836(A;A)
Make rs279836(A;T)
Make rs279836(T;T)
ReferenceGRCh38 38.1/141
Chromosome4
Position46337053
GeneGABRA2
is asnp
is mentioned by
dbSNPrs279836
dbSNP (classic)rs279836
ClinGenrs279836
ebirs279836
HLIrs279836
Exacrs279836
Gnomadrs279836
Varsomers279836
LitVarrs279836
Maprs279836
PheGenIrs279836
Biobankrs279836
1000 genomesrs279836
hgdprs279836
ensemblrs279836
geneviewrs279836
scholarrs279836
googlers279836
pharmgkbrs279836
gwascentralrs279836
openSNPrs279836
23andMers279836
SNPshotrs279836
SNPdbers279836
MSV3drs279836
GWAS Ctlgrs279836
GMAF0.4224
Max Magnitude0
? (A;A) (A;T) (T;T) 28


This SNP in the GABRA2 gene has been linked to Alcoholism.

The strongest association for this SNP is seen when it is a member of a haplotype consisting of the rs279871(A) + rs279845(T) + rs279836(A) alleles [PMID 15024690OA-icon.png].

OMIM137140
DescGAMMA-AMINOBUTYRIC ACID RECEPTOR, ALPHA-2; GABRA2
Variant
Relatedalso
OMIM137140
Desc
Variant0003
Relatedalso


[PMID 22501025OA-icon.png] GABRA2 markers moderate the subjective effects of alcohol


[PMID 18634760OA-icon.png] Uncovering genes for cognitive (dys)function and predisposition for alcoholism spectrum disorders: a review of human brain oscillations as effective endophenotypes.


[PMID 18727688OA-icon.png] The role of GABRA2 in alcohol dependence, smoking, and illicit drug use in an Australian population sample.


[PMID 19487630OA-icon.png] Role of GABRA2 in trajectories of externalizing behavior across development and evidence of moderation by parental monitoring.


[PMID 20133874OA-icon.png] Cocaine effects on mouse incentive-learning and human addiction are linked to alpha2 subunit-containing GABAA receptors.


ClinVar
Risk rs279836(A;A)
Alt rs279836(A;A)
Reference rs279836(T;T)
Significance Other
Disease Alcoholism
Variation info
Gene GABRA2
CLNDBN Alcoholism, susceptibility to
Reversed 0
HGVS NC_000004.11:g.46339070T>A
CLNSRC OMIM Allelic Variant
CLNACC RCV000017607.3,