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rs522162

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;A) 0 common in complete genomics
Make rs522162(A;G)
Make rs522162(G;G)
ReferenceGRCh38 38.1/141
Chromosome6
Position31952140
GeneCFB, NELFE
is asnp
is mentioned by
dbSNPrs522162
dbSNP (classic)rs522162
ClinGenrs522162
ebirs522162
HLIrs522162
Exacrs522162
Gnomadrs522162
Varsomers522162
LitVarrs522162
Maprs522162
PheGenIrs522162
Biobankrs522162
1000 genomesrs522162
hgdprs522162
ensemblrs522162
geneviewrs522162
scholarrs522162
googlers522162
pharmgkbrs522162
gwascentralrs522162
openSNPrs522162
23andMers522162
SNPshotrs522162
SNPdbers522162
MSV3drs522162
GWAS Ctlgrs522162
GMAF0.09963
Max Magnitude0
? (A;A) (A;G) (G;G) 28


association with age-related macular degeneration (ARMD) [PMID 16518403OA-icon.png]

risk allele said to be (A), in dbSNP orientation (ref: [1]

Navigenics apparently uses rs522162 as a proxy (substitute) for rs641153


[PMID 20385826OA-icon.png] Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC).

GWAS snp
PMID [PMID 23577725OA-icon.png]
Trait Age-related macular degeneration
Title Genetic factors in nonsmokers with age-related macular degeneration revealed through genome-wide gene-environment interaction analysis.
Risk Allele
P-val 2E-10
Odds Ratio 2.33 [1.82-3.03]