Difference between revisions of "Rs11663206"
From SNPedia
(Update Rsnum - Set: Orientation position Assembly GenomeBuild dbSNPBuild) |
OrientalBot (talk | contribs) (Set on chip 23andMe v5) |
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{{Rsnum | {{Rsnum | ||
|rsid=11663206 | |rsid=11663206 | ||
| + | |Chromosome=18 | ||
| + | |position=70486384 | ||
| + | |Orientation=plus | ||
| + | |GMAF=0.2397 | ||
| + | |Assembly=GRCh38 | ||
| + | |GenomeBuild=38.1 | ||
| + | |dbSNPBuild=141 | ||
|geno1=(C;C) | |geno1=(C;C) | ||
|geno2=(C;T) | |geno2=(C;T) | ||
|geno3=(T;T) | |geno3=(T;T) | ||
| − | | | + | |StabilizedOrientation=plus |
| − | + | |Gene_s=LOC105376872 | |
| − | | | + | |Gene=LOC105376872 |
| − | |||
| − | |||
| − | | | ||
}}{{ population diversity | }}{{ population diversity | ||
| geno1=(C;C) | | geno1=(C;C) | ||
| geno2=(C;T) | | geno2=(C;T) | ||
| geno3=(T;T) | | geno3=(T;T) | ||
| − | | CEU | | + | | CEU | 72.3 | 18.5 | 9.2 |
| HCB | 79.1 | 16.3 | 4.7 | | HCB | 79.1 | 16.3 | 4.7 | ||
| JPT | 88.9 | 11.1 | 0.0 | | JPT | 88.9 | 11.1 | 0.0 | ||
| − | | YRI | | + | | YRI | 9.5 | 46.0 | 44.4 |
| ASW | 0.0 | 0.0 | 0.0 | | ASW | 0.0 | 0.0 | 0.0 | ||
| CHB | 79.1 | 16.3 | 4.7 | | CHB | 79.1 | 16.3 | 4.7 | ||
| Line 26: | Line 30: | ||
| MKK | 0.0 | 0.0 | 0.0 | | MKK | 0.0 | 0.0 | 0.0 | ||
| TSI | 0.0 | 0.0 | 0.0 | | TSI | 0.0 | 0.0 | 0.0 | ||
| − | | HapMapRevision= | + | | HapMapRevision=28 |
| − | }}{{PMID|20195266}} gwas, among 738 schizophrenics genotyped for 492K SNPs, this SNP attained a p-val of 2 x 10^-6 for hemoglobin A1c as a result of [[risperidone]] use | + | }}{{PMID|20195266|OA=1 |
| + | }} gwas, among 738 schizophrenics genotyped for 492K SNPs, this SNP attained a p-val of 2 x 10^-6 for hemoglobin A1c as a result of [[risperidone]] use | ||
| + | {{on chip | 23andMe v3}} | ||
| + | {{on chip | 23andMe v4}} | ||
{{on chip | HumanOmni1Quad}} | {{on chip | HumanOmni1Quad}} | ||
| + | {{on chip | 23andMe v5}} | ||
Latest revision as of 21:00, 3 September 2017
| Orientation | plus |
| Stabilized | plus |
| Make rs11663206(C;C) |
| Make rs11663206(C;T) |
| Make rs11663206(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 18 |
| Position | 70486384 |
| Gene | LOC105376872 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11663206 |
| dbSNP (classic) | rs11663206 |
| ClinGen | rs11663206 |
| ebi | rs11663206 |
| HLI | rs11663206 |
| Exac | rs11663206 |
| Gnomad | rs11663206 |
| Varsome | rs11663206 |
| LitVar | rs11663206 |
| Map | rs11663206 |
| PheGenI | rs11663206 |
| Biobank | rs11663206 |
| 1000 genomes | rs11663206 |
| hgdp | rs11663206 |
| ensembl | rs11663206 |
| geneview | rs11663206 |
| scholar | rs11663206 |
| rs11663206 | |
| pharmgkb | rs11663206 |
| gwascentral | rs11663206 |
| openSNP | rs11663206 |
| 23andMe | rs11663206 |
| SNPshot | rs11663206 |
| SNPdbe | rs11663206 |
| MSV3d | rs11663206 |
| GWAS Ctlg | rs11663206 |
| GMAF | 0.2397 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 20195266
] gwas, among 738 schizophrenics genotyped for 492K SNPs, this SNP attained a p-val of 2 x 10^-6 for hemoglobin A1c as a result of risperidone use
