Difference between revisions of "Rs16964465"
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{{Rsnum | {{Rsnum | ||
| − | |rsid =16964465 | + | |rsid=16964465 |
| − | |Gene = SCG3 | + | |Gene=SCG3 |
| + | |Chromosome=15 | ||
| + | |position=51680150 | ||
|Orientation=plus | |Orientation=plus | ||
| + | |GMAF=0.07117 | ||
| + | |Assembly=GRCh38 | ||
| + | |GenomeBuild=38.1 | ||
| + | |dbSNPBuild=141 | ||
|geno1=(A;A) | |geno1=(A;A) | ||
|geno2=(A;C) | |geno2=(A;C) | ||
|geno3=(C;C) | |geno3=(C;C) | ||
| − | | | + | |Gene_s=SCG3 |
| − | | | + | |StabilizedOrientation=plus |
}}{{ population diversity | }}{{ population diversity | ||
| geno1=(A;A) | | geno1=(A;A) | ||
| Line 15: | Line 21: | ||
| HCB | 86.7 | 13.3 | 0.0 | | HCB | 86.7 | 13.3 | 0.0 | ||
| JPT | 72.7 | 27.3 | 0.0 | | JPT | 72.7 | 27.3 | 0.0 | ||
| − | | YRI | 63. | + | | YRI | 63.8 | 27.6 | 8.6 |
| ASW | 0.0 | 0.0 | 0.0 | | ASW | 0.0 | 0.0 | 0.0 | ||
| CHB | 86.7 | 13.3 | 0.0 | | CHB | 86.7 | 13.3 | 0.0 | ||
| Line 24: | Line 30: | ||
| MKK | 0.0 | 0.0 | 0.0 | | MKK | 0.0 | 0.0 | 0.0 | ||
| TSI | 0.0 | 0.0 | 0.0 | | TSI | 0.0 | 0.0 | 0.0 | ||
| − | | HapMapRevision= | + | | HapMapRevision=28 |
| − | }}[[rs16964465]] [[rs16964476]] may influence the risk of [[obesity]] through possible regulation of hypothalamic neuropeptide secretion | + | }}[[rs16964465]] [[rs16964476]] may influence the risk of [[obesity]] through possible regulation of hypothalamic neuropeptide secretion {{PMID|17200173}} |
| − | {{ | + | |
| − | | | + | |
| − | |||
| − | }} | ||
| − | |||
| − | |||
| − | |||
| − | |||
{{omim | {{omim | ||
| + | |desc=SECRETOGRANIN III; SCG3 | ||
|id=611796 | |id=611796 | ||
| − | |||
|rsnum=16964465 | |rsnum=16964465 | ||
}} | }} | ||
| − | |||
{{on chip | 23andMe v1}} | {{on chip | 23andMe v1}} | ||
{{on chip | 23andMe v2}} | {{on chip | 23andMe v2}} | ||
| + | {{on chip | 23andMe v3}} | ||
| + | {{on chip | 23andMe v4}} | ||
{{on chip | HumanOmni1Quad}} | {{on chip | HumanOmni1Quad}} | ||
Latest revision as of 14:10, 6 January 2018
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in complete genomics |
| Make rs16964465(A;C) |
| Make rs16964465(C;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 15 |
| Position | 51680150 |
| Gene | SCG3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs16964465 |
| dbSNP (classic) | rs16964465 |
| ClinGen | rs16964465 |
| ebi | rs16964465 |
| HLI | rs16964465 |
| Exac | rs16964465 |
| Gnomad | rs16964465 |
| Varsome | rs16964465 |
| LitVar | rs16964465 |
| Map | rs16964465 |
| PheGenI | rs16964465 |
| Biobank | rs16964465 |
| 1000 genomes | rs16964465 |
| hgdp | rs16964465 |
| ensembl | rs16964465 |
| geneview | rs16964465 |
| scholar | rs16964465 |
| rs16964465 | |
| pharmgkb | rs16964465 |
| gwascentral | rs16964465 |
| openSNP | rs16964465 |
| 23andMe | rs16964465 |
| SNPshot | rs16964465 |
| SNPdbe | rs16964465 |
| MSV3d | rs16964465 |
| GWAS Ctlg | rs16964465 |
| GMAF | 0.07117 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
rs16964465 rs16964476 may influence the risk of obesity through possible regulation of hypothalamic neuropeptide secretion [PMID 17200173]
