Difference between revisions of "Rs6092078"
From SNPedia
Meightysix (talk | contribs) (Created page with '{{Rsnum |rsid=6092078 }} {{PMID|20195266}} gwas, among 738 schizophrenics genotyped for 492K SNPs, this SNP attained a p-val of 3 x 10^-6 for hip circumference as a result of [[...') |
OrientalBot (talk | contribs) (Set on chip ancestryv2) |
||
| (15 intermediate revisions by 4 users not shown) | |||
| Line 1: | Line 1: | ||
{{Rsnum | {{Rsnum | ||
|rsid=6092078 | |rsid=6092078 | ||
| − | }} | + | |Chromosome=20 |
| + | |position=55184590 | ||
| + | |Orientation=plus | ||
| + | |GMAF=0.1042 | ||
| + | |Assembly=GRCh38 | ||
| + | |GenomeBuild=38.1 | ||
| + | |dbSNPBuild=141 | ||
| + | |geno1=(A;A) | ||
| + | |geno2=(A;G) | ||
| + | |geno3=(G;G) | ||
| + | |StabilizedOrientation=plus | ||
| + | }}{{ population diversity | ||
| + | | geno1=(A;A) | ||
| + | | geno2=(A;G) | ||
| + | | geno3=(G;G) | ||
| + | | CEU | 0.0 | 0.9 | 99.1 | ||
| + | | HCB | 0.0 | 0.0 | 100.0 | ||
| + | | JPT | 0.0 | 0.0 | 100.0 | ||
| + | | YRI | 12.9 | 46.9 | 40.1 | ||
| + | | ASW | 12.3 | 42.1 | 45.6 | ||
| + | | CHB | 0.0 | 0.0 | 100.0 | ||
| + | | CHD | 0.0 | 0.0 | 0.0 | ||
| + | | GIH | 0.0 | 1.0 | 99.0 | ||
| + | | LWK | 23.6 | 50.0 | 26.4 | ||
| + | | MEX | 0.0 | 13.8 | 86.2 | ||
| + | | MKK | 22.4 | 51.3 | 26.3 | ||
| + | | TSI | 0.0 | 1.0 | 99.0 | ||
| + | | HapMapRevision=28 | ||
| + | }}{{PMID|20195266|OA=1 | ||
| + | }} gwas, among 738 schizophrenics genotyped for 492K SNPs, this SNP attained a p-val of 3 x 10^-6 for hip circumference as a result of [[risperidone]] use | ||
| − | {{ | + | {{on chip | Affy GenomeWide 6}} |
| + | {{on chip | Ancestry v2}} | ||
| + | {{on chip | 23andMe v5}} | ||
| + | {{on chip | Ancestry v2c}} | ||
| + | {{on chip | Ancestry v2d}} | ||
Latest revision as of 11:34, 7 December 2019
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs6092078(A;A) |
| Make rs6092078(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 20 |
| Position | 55184590 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6092078 |
| dbSNP (classic) | rs6092078 |
| ClinGen | rs6092078 |
| ebi | rs6092078 |
| HLI | rs6092078 |
| Exac | rs6092078 |
| Gnomad | rs6092078 |
| Varsome | rs6092078 |
| LitVar | rs6092078 |
| Map | rs6092078 |
| PheGenI | rs6092078 |
| Biobank | rs6092078 |
| 1000 genomes | rs6092078 |
| hgdp | rs6092078 |
| ensembl | rs6092078 |
| geneview | rs6092078 |
| scholar | rs6092078 |
| rs6092078 | |
| pharmgkb | rs6092078 |
| gwascentral | rs6092078 |
| openSNP | rs6092078 |
| 23andMe | rs6092078 |
| SNPshot | rs6092078 |
| SNPdbe | rs6092078 |
| MSV3d | rs6092078 |
| GWAS Ctlg | rs6092078 |
| GMAF | 0.1042 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 20195266
] gwas, among 738 schizophrenics genotyped for 492K SNPs, this SNP attained a p-val of 3 x 10^-6 for hip circumference as a result of risperidone use
