Difference between revisions of "Rs6092078"
From SNPedia
SNPediaBot (talk | contribs) m (set GMAF to 0.1042) |
OrientalBot (talk | contribs) (Set on chip ancestryv2) |
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| Line 2: | Line 2: | ||
|rsid=6092078 | |rsid=6092078 | ||
|Chromosome=20 | |Chromosome=20 | ||
| − | |position= | + | |position=55184590 |
|Orientation=plus | |Orientation=plus | ||
|GMAF=0.1042 | |GMAF=0.1042 | ||
| − | |Assembly= | + | |Assembly=GRCh38 |
| − | |GenomeBuild= | + | |GenomeBuild=38.1 |
| − | |dbSNPBuild= | + | |dbSNPBuild=141 |
|geno1=(A;A) | |geno1=(A;A) | ||
|geno2=(A;G) | |geno2=(A;G) | ||
|geno3=(G;G) | |geno3=(G;G) | ||
| − | }} | + | |StabilizedOrientation=plus |
| − | {{ population diversity | + | }}{{ population diversity |
| geno1=(A;A) | | geno1=(A;A) | ||
| geno2=(A;G) | | geno2=(A;G) | ||
| Line 33: | Line 33: | ||
{{on chip | Affy GenomeWide 6}} | {{on chip | Affy GenomeWide 6}} | ||
| + | {{on chip | Ancestry v2}} | ||
| + | {{on chip | 23andMe v5}} | ||
| + | {{on chip | Ancestry v2c}} | ||
| + | {{on chip | Ancestry v2d}} | ||
Latest revision as of 11:34, 7 December 2019
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs6092078(A;A) |
| Make rs6092078(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 20 |
| Position | 55184590 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6092078 |
| dbSNP (classic) | rs6092078 |
| ClinGen | rs6092078 |
| ebi | rs6092078 |
| HLI | rs6092078 |
| Exac | rs6092078 |
| Gnomad | rs6092078 |
| Varsome | rs6092078 |
| LitVar | rs6092078 |
| Map | rs6092078 |
| PheGenI | rs6092078 |
| Biobank | rs6092078 |
| 1000 genomes | rs6092078 |
| hgdp | rs6092078 |
| ensembl | rs6092078 |
| geneview | rs6092078 |
| scholar | rs6092078 |
| rs6092078 | |
| pharmgkb | rs6092078 |
| gwascentral | rs6092078 |
| openSNP | rs6092078 |
| 23andMe | rs6092078 |
| SNPshot | rs6092078 |
| SNPdbe | rs6092078 |
| MSV3d | rs6092078 |
| GWAS Ctlg | rs6092078 |
| GMAF | 0.1042 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 20195266
] gwas, among 738 schizophrenics genotyped for 492K SNPs, this SNP attained a p-val of 3 x 10^-6 for hip circumference as a result of risperidone use
