rs121912515
From SNPedia
Revision as of 22:41, 11 August 2017 by OrientalBot (talk | contribs) (change Gene_s=KCNH2,LOC107986861;change Gene=KCNH2)
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs121912515(C;G) |
| Make rs121912515(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 150974720 |
| Gene | KCNH2, LOC107986861 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs121912515 |
| dbSNP (classic) | rs121912515 |
| ClinGen | rs121912515 |
| ebi | rs121912515 |
| HLI | rs121912515 |
| Exac | rs121912515 |
| Gnomad | rs121912515 |
| Varsome | rs121912515 |
| LitVar | rs121912515 |
| Map | rs121912515 |
| PheGenI | rs121912515 |
| Biobank | rs121912515 |
| 1000 genomes | rs121912515 |
| hgdp | rs121912515 |
| ensembl | rs121912515 |
| geneview | rs121912515 |
| scholar | rs121912515 |
| rs121912515 | |
| pharmgkb | rs121912515 |
| gwascentral | rs121912515 |
| openSNP | rs121912515 |
| 23andMe | rs121912515 |
| SNPshot | rs121912515 |
| SNPdbe | rs121912515 |
| MSV3d | rs121912515 |
| GWAS Ctlg | rs121912515 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | rs121912515(A;A) rs121912515(G;G) rs121912515(T;T) |
| Alt | rs121912515(A;A) rs121912515(G;G) rs121912515(T;T) |
| Reference | Rs121912515(C;C) |
| Significance | Pathogenic |
| Disease | Congenital long QT syndrome Long QT syndrome 2/3 not provided |
| Variation | info |
| Gene | KCNH2 |
| CLNDBN | Congenital long QT syndrome Long QT syndrome 2/3, digenic not provided |
| Reversed | 1 |
| HGVS | NC_000007.13:g.150671808G>A; NC_000007.13:g.150671808G>C |
| CLNSRC | UniProtKB (protein) OMIM Allelic Variant |
| CLNACC | RCV000058187.3, RCV000015525.26, RCV000058186.3, RCV000181948.1, |
[PMID 16922724] Spectrum of pathogenic mutations and associated polymorphisms in a cohort of 44 unrelated patients with long QT syndrome.
[PMID 19716085
] Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test.
