rs1828591
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common/normal |
(A;G) | 1.5 | Reduced risk (0.77x) of chronic obstructive pulmonary disease (COPD) |
(G;G) | 2 | Reduced risk (0.54x) for chronic pulmonary obstructive disease (COPD) |
Reference | GRCh38 38.1/141 |
Chromosome | 4 |
Position | 144559628 |
Gene | LOC105377462 |
is a | snp |
is | mentioned by |
dbSNP | rs1828591 |
dbSNP (classic) | rs1828591 |
ClinGen | rs1828591 |
ebi | rs1828591 |
HLI | rs1828591 |
Exac | rs1828591 |
Gnomad | rs1828591 |
Varsome | rs1828591 |
LitVar | rs1828591 |
Map | rs1828591 |
PheGenI | rs1828591 |
Biobank | rs1828591 |
1000 genomes | rs1828591 |
hgdp | rs1828591 |
ensembl | rs1828591 |
geneview | rs1828591 |
scholar | rs1828591 |
rs1828591 | |
pharmgkb | rs1828591 |
gwascentral | rs1828591 |
openSNP | rs1828591 |
23andMe | rs1828591 |
SNPshot | rs1828591 |
SNPdbe | rs1828591 |
MSV3d | rs1828591 |
GWAS Ctlg | rs1828591 |
GMAF | 0.388 |
Max Magnitude | 2 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
This SNP has been recognized by the Coriell Personalized Medicine Collaborative ICOB.
|
GWAS snp | |
---|---|
PMID | [PMID 19300482] |
Trait | Chronic Obstructive Pulmonary Disease |
Title | A Genome-Wide Association Study in Chronic Obstructive Pulmonary Disease (COPD): Identification of Two Major Susceptibility Loci |
Risk Allele | |
P-val | 1E-7 |
Odds Ratio | 1.38 [1.17-1.63] |
[PMID 19300500] A genome-wide association study of pulmonary function measures in the Framingham Heart Study.
[PMID 19996190] Hedgehog-interacting protein is a COPD susceptibility gene: the Rotterdam Study.
[PMID 23886569] Transient early wheeze and lung function in early childhood associated with chronic obstructive pulmonary disease genes
[PMID 23936167] Refining Susceptibility Loci of Chronic Obstructive Pulmonary Disease with Lung eqtls
[PMID 25073350] [Genetic aspects of occupational chronic obstructive lung disease under exposure to various risk factors]
[PMID 28939338] Comparison of the role of HHIP SNPs in susceptibility to chronic obstructive pulmonary disease between Chinese Han and Mongolian populations.