Gs1038

Gs1038
Magnitude	1.2
Repute
Summary	Mitochondrial Haplogroup H4b
Criteria	Gs1038/criteria

This is the genoset for a mitochondrial DNA haplogroup. H4b is a subclade of H4.

Criteria

• Defining SNPs for N
  • A10398A, rs2853826(A;A)
  • T10873T, rs2857284(T;T)
  • G15301G, rs28573847(G;G) OR i3001523(G;G)
  • A8701A, i3000759(A;A)
  • T9540T, rs2248727(T;T) OR i3001497(T;T)

This will be set to require only one of these as confirmation of downstream N status.

• Defining SNPs for R
  • C12705C, rs2854122(C;C)
  • C16223C

Nether of these is on the 23andMe V2 Chip.

• Defining SNPs for R0
  • G11719G, rs2853495(G;G) OR i3001044(G;G)
  • A73A, i3001587(A;A)

73A will be excluded downstream of HV as it frequently back mutates.

• Defining SNPs for HV
  • C14766C

This is not on the 23andMe V2 Chip.

• Defining SNPs for H
  • A2706A, rs2854128(A;A)
  • C7028C, rs2015062(C;C)

This will be set to require only one of these to confirm H status.

• Defining SNPs for H4
  • C3992T, rs41402945(T;T) OR i3001460(T;T)
  • T5004C, rs41419549(C;C) OR i3001469(C;C)
  • G9123A, i3000806(A;A)

This will require only two of the three SNPs to deal with possible back mutations.

• Defining SNPs for H4b
  • T10166C, i3000889(C;C)

Criteria Code

and(
    gs1001,
    atleast(2, 
             or(rs41402945(T;T),i3001460(T;T)), 
             or(rs41419549(C;C),i3001469(C;C)), 
             i3000806(A;A)),
    i3000889(C;C),
   )

See Also

• i3000889

Links

• Ian Logan's mtDNA Website
• Wikipedia mtDNA