Gs1048

Gs1048
Magnitude	1.2
Repute
Summary	Mitochondrial Haplogroup H6a1b1
Criteria	Gs1048/criteria

This is the genoset for a mitochondrial DNA haplogroup. H6a1b1 is a subclade of H6a1b.

Criteria

• Defining SNPs for N
  • A10398A, rs2853826(A;A)
  • T10873T, rs2857284(T;T)
  • G15301G, rs28573847(G;G) OR i3001523(G;G)
  • A8701A, i3000759(A;A)
  • T9540T, rs2248727(T;T) OR i3001497(T;T)

This will be set to require only one of these as confirmation of downstream N status.

• Defining SNPs for R
  • C12705C, rs2854122(C;C)
  • C16223C

Nether of these is on the 23andMe V2 Chip.

• Defining SNPs for R0
  • G11719G, rs2853495(G;G) OR i3001044(G;G)
  • A73A, i3001587(A;A)

73A will be excluded downstream of HV as it frequently back mutates.

• Defining SNPs for HV
  • C14766C

This is not on the 23andMe V2 Chip.

• Defining SNPs for H
  • A2706A, rs2854128(A;A)
  • C7028C, rs2015062(C;C)

This will be set to require only one of these to confirm H status.

• Defining SNPs for H6
  • T239C, i3000595(C;C)
  • T6362C
  • A16482G, i3001925(G;G)

• Defining SNPs for H6a
  • G3915A, rs41524046(A;A) OR i3001458(A;A)

• Defining SNPs for H6a1
  • A4727G, i3002187(G;G)
  • G9380A

• Defining SNPs for H6a1b
  • G10589A, rs2853487(A;A)

• Defining SNPs for H6a1b1
  • A6218G
  • G7859A, i4001187(A;A)
  • A16284G, i3001794(G;G)
  • T16519C

Criteria Code

and(
    gs1001,
    i3001925(G;G), 
    i3000595(C;C),
    or(rs41524046(A;A),i3001458(A;A)),
    i3002187(G;G),
    rs2853487(A;A),
    i4001187(A;A),
    i3001794(G;G),
   )

See Also

• i4001187
• i3001794

Links

• Ian Logan's mtDNA Website
• Wikipedia mtDNA