HLA-DPA1
From SNPedia
| is a | gene |
| is | mentioned by |
| Full name | major histocompatibility complex, class II, DP alpha 1 |
| EntrezGene | 3113 |
| PheGenI | 3113 |
| VariationViewer | 3113 |
| ClinVar | HLA-DPA1 |
| GeneCards | HLA-DPA1 |
| dbSNP | 3113 |
| Diseases | HLA-DPA1 |
| SADR | 3113 |
| HugeNav | 3113 |
| wikipedia | HLA-DPA1 |
| HLA-DPA1 | |
| gopubmed | HLA-DPA1 |
| EVS | HLA-DPA1 |
| HEFalMp | HLA-DPA1 |
| MyGene2 | HLA-DPA1 |
| 23andMe | HLA-DPA1 |
| UniProt | P20036 |
| Ensembl | ENSG00000231389 |
| OMIM | 142880 |
| # SNPs | 13 |
| Max Magnitude | Chromosome position | Summary | |
|---|---|---|---|
| rs1042151 | 0 | 33,080,884 | |
| rs1042178 | 0 | 33,069,745 | |
| rs1126511 | 0 | 33,080,689 | |
| rs144045930 | 0 | 33,068,660 | |
| rs2071349 | 0 | 33,075,743 | |
| rs2856830 | 0 | 33,073,957 | |
| rs3077 | 2 | 33,065,245 | |
| rs6914849 | 0 | 33,072,938 | |
| rs9277341 | 0 | 33,071,848 | |
| rs9277346 | 0 | 33,080,689 | |
| rs9277359 | 0 | 33,082,247 | |
| rs9277378 | 0 | 33,082,502 | |
| rs987870 | 0 | 33,075,103 |
HLA-DPA1 codes the alpha unit of the HLA-DP type.
Rs3077 has been associated with Hepatitis B infection risk.
Tag SNPs for HLA-DPA1 antitypes on the 1M Illumina chip[edit]
| HLA | SNP | r2 | HLA_FRQ | SNP_FRQ |
|---|---|---|---|---|
| DPA1*01:04 | rs11751659 | 0.062 | 0.010 | 0.11 |
| DPA1*01:05 | rs9468942 | 0.010 | 0.001 | 0.01 |
| DPA1*02:02 | rs1431403 | 0.077 | 0.060 | 0.34 |
| DPA1*03:01 | rs9468559 | 0.030 | 0.010 | 0.02 |
| DPA1*04:01 | rs7763822 | 0.016 | 0.003 | 0.04 |
