rs102275
| Orientation | minus |
| Stabilized | minus |
| Make rs102275(A;A) |
| Make rs102275(A;G) |
| Make rs102275(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 61790331 |
| Gene | TMEM258 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs102275 |
| dbSNP (classic) | rs102275 |
| ClinGen | rs102275 |
| ebi | rs102275 |
| HLI | rs102275 |
| Exac | rs102275 |
| Gnomad | rs102275 |
| Varsome | rs102275 |
| LitVar | rs102275 |
| Map | rs102275 |
| PheGenI | rs102275 |
| Biobank | rs102275 |
| 1000 genomes | rs102275 |
| hgdp | rs102275 |
| ensembl | rs102275 |
| geneview | rs102275 |
| scholar | rs102275 |
| rs102275 | |
| pharmgkb | rs102275 |
| gwascentral | rs102275 |
| openSNP | rs102275 |
| 23andMe | rs102275 |
| SNPshot | rs102275 |
| SNPdbe | rs102275 |
| MSV3d | rs102275 |
| GWAS Ctlg | rs102275 |
| GMAF | 0.4821 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20694148 ]
|
| Trait | |
| Title | A genome-wide association study of the metabolic syndrome in Indian Asian men |
| Risk Allele | |
| P-val | 6E-7 |
| Odds Ratio | None None |
| GWAS snp | |
|---|---|
| PMID | [PMID 21102463]
|
| Trait | |
| Title | Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci |
| Risk Allele | C |
| P-val | 2E-11 |
| Odds Ratio | 1.0800 [1.04-1.12] |
| GWAS snp | |
|---|---|
| PMID | [PMID 21829377]
|
| Trait | |
| Title | Genetic Loci Associated with Plasma Phospholipid n-3 Fatty Acids: A Meta-Analysis of Genome-Wide Association Studies from the CHARGE Consortium. |
| Risk Allele | T |
| P-val | 7E-64 |
| Odds Ratio | 0.0200 [NR] % dcrease |
| GWAS snp | |
|---|---|
| PMID | [PMID 22359512]
|
| Trait | |
| Title | Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations. |
| Risk Allele | |
| P-val | 0 |
| Odds Ratio | 0 None |
[PMID 19060906] Common variants at 30 loci contribute to polygenic dyslipidemia.
[PMID 19060910] Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
[PMID 19750004] A systems genetics approach implicates USF1, FADS3, and other causal candidate genes for familial combined hyperlipidemia.
[PMID 19798445] Genetic determinants of circulating sphingolipid concentrations in European populations.
| GWAS snp | |
|---|---|
| PMID | [PMID 22916037]
|
| Trait | Metabolite levels |
| Title | Novel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis. |
| Risk Allele | |
| P-val | 4E-264 |
| Odds Ratio | NR NR |
| GWAS snp | |
|---|---|
| PMID | [PMID 23362303]
|
| Trait | Oleic acid (18:1n-9) plasma levels |
| Title | Genome-wide association study identifies novel loci associated with concentrations of four plasma phospholipid fatty acids in the de novo lipogenesis pathway: results from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortium. |
| Risk Allele | C |
| P-val | 2E-32 |
| Odds Ratio | .23 [0.192-0.268] unit increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 24823311]
|
| Trait | Plasma omega-6 polyunsaturated fatty acid levels (arachidonic acid) |
| Title | Genome-wide association study of plasma N6 polyunsaturated fatty acids within the cohorts for heart and aging research in genomic epidemiology consortium. |
| Risk Allele | C |
| P-val | 7E-147 |
| Odds Ratio | 2.49 [2.29-2.69] unit decrease |
[PMID 30143393] Evidence for a potential role of miR-1908-5p and miR-3614-5p in autoimmune disease risk using integrative bioinformatics.
[PMID 31991592] Genome-Wide Association Study for Serum Omega-3 and Omega-6 Polyunsaturated Fatty Acids: Exploratory Analysis of the Sex-Specific Effects and Dietary Modulation in Mediterranean Subjects with Metabolic Syndrome.
