rs10486567
| Orientation | plus |
| Stabilized | plus |
| Make rs10486567(A;A) |
| Make rs10486567(A;G) |
| Make rs10486567(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 27936944 |
| Gene | JAZF1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10486567 |
| dbSNP (classic) | rs10486567 |
| ClinGen | rs10486567 |
| ebi | rs10486567 |
| HLI | rs10486567 |
| Exac | rs10486567 |
| Gnomad | rs10486567 |
| Varsome | rs10486567 |
| LitVar | rs10486567 |
| Map | rs10486567 |
| PheGenI | rs10486567 |
| Biobank | rs10486567 |
| 1000 genomes | rs10486567 |
| hgdp | rs10486567 |
| ensembl | rs10486567 |
| geneview | rs10486567 |
| scholar | rs10486567 |
| rs10486567 | |
| pharmgkb | rs10486567 |
| gwascentral | rs10486567 |
| openSNP | rs10486567 |
| 23andMe | rs10486567 |
| SNPshot | rs10486567 |
| SNPdbe | rs10486567 |
| MSV3d | rs10486567 |
| GWAS Ctlg | rs10486567 |
| GMAF | 0.4541 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
nature identifies rs10486567 rs10993994 rs10896449 in prostate cancer
| GWAS | |
|---|---|
| SNP | rs10486567 |
| PubMedID | [PMID 18264096] |
| Condition | Prostate cancer (aggressive) |
| Gene | JAZF1 |
| Risk Allele | G |
| pValue | 2.00E-006 |
| OR | 1.12 |
| 95% CI | 1.02-1.25 |
[PMID 20406958
] Refining the Prostate Cancer Genetic Association within the JAZF1 Gene on Chromosome 7p15.2
[PMID 20460480] Susceptibility loci associated with prostate cancer progression and mortality
[PMID 18794092] Association of prostate cancer risk variants with clinicopathologic characteristics of the disease.
[PMID 18974127] Association study of prostate cancer susceptibility variants with risks of invasive ovarian, breast, and colorectal cancer.
[PMID 19104501] Prostate cancer genomics: towards a new understanding.
[PMID 19318432] Generalizability of associations from prostate cancer genome-wide association studies in multiple populations.
[PMID 19366831] Analysis of recently identified prostate cancer susceptibility loci in a population-based study: associations with family history and clinical features.
[PMID 19434657] Individual and cumulative effect of prostate cancer risk-associated variants on clinicopathologic variables in 5,895 prostate cancer patients.
[PMID 19549807] Prostate cancer risk associated loci in African Americans.
[PMID 19838195] A large-scale replication study identifies TNIP1, PRDM1, JAZF1, UHRF1BP1 and IL10 as risk loci for systemic lupus erythematosus.
[PMID 19998368] HNF1B and JAZF1 genes, diabetes, and prostate cancer risk.
[PMID 20039378] Estimation of genotype relative risks from pedigree data by retrospective likelihoods.
[PMID 20450899] Individual and cumulative association of prostate cancer susceptibility variants with clinicopathologic characteristics of the disease.
[PMID 20569440] Alterations in LMTK2, MSMB and HNF1B gene expression are associated with the development of prostate cancer.
[PMID 20690139] Meta-analysis of genome-wide and replication association studies on prostate cancer.
[PMID 21071540] Validation of genome-wide prostate cancer associations in men of African descent.
[PMID 21390317] Characterizing associations and SNP-environment interactions for GWAS-identified prostate cancer risk markers--results from BPC3.
[PMID 21538423] Early onset prostate cancer has a significant genetic component.
[PMID 24411283] Prostate Cancer (PCa) Risk Variants and Risk of Fatal PCa in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium
[PMID 24497837] Comprehensive functional annotation of 77 prostate cancer risk Loci
[PMID 24801046] Gene-environment interactions between JAZF1 and occupational and household lead exposure in prostate cancer among African American men
