rs104893915
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 3 | carrier of one allele associated with several bone disorders |
| (T;T) | 7 | Several bone disorders associated with this genotype |
| Reference | GRCh38 38.1/141 |
| Chromosome | 5 |
| Position | 149980428 |
| Gene | SLC26A2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs104893915 |
| dbSNP (classic) | rs104893915 |
| ClinGen | rs104893915 |
| ebi | rs104893915 |
| HLI | rs104893915 |
| Exac | rs104893915 |
| Gnomad | rs104893915 |
| Varsome | rs104893915 |
| LitVar | rs104893915 |
| Map | rs104893915 |
| PheGenI | rs104893915 |
| Biobank | rs104893915 |
| 1000 genomes | rs104893915 |
| hgdp | rs104893915 |
| ensembl | rs104893915 |
| geneview | rs104893915 |
| scholar | rs104893915 |
| rs104893915 | |
| pharmgkb | rs104893915 |
| gwascentral | rs104893915 |
| openSNP | rs104893915 |
| 23andMe | rs104893915 |
| SNPshot | rs104893915 |
| SNPdbe | rs104893915 |
| MSV3d | rs104893915 |
| GWAS Ctlg | rs104893915 |
| GMAF | 0.0004591 |
| Max Magnitude | 7 |
rs104893915, also known as c.835C>T, p.Arg279Trp and R279W, is a mutation in the SLC26A2 gene on chromosome 5.
The rare rs104893915(T) variant, when inherited recessively or as a compound heterozygote, has been considered a causative mutation for several conditions, including:
- Atelosteogenesis type 2
- Diastrophic dysplasia
- Multiple epiphyseal dysplasia, type 4
See OMIM 606718.0002 for more information.
| ClinVar | |
|---|---|
| Risk | Rs104893915(T;T) |
| Alt | Rs104893915(T;T) |
| Reference | Rs104893915(C;C) |
| Significance | Pathogenic |
| Disease | Atelosteogenesis type 2 Diastrophic dysplasia Multiple epiphyseal dysplasia 4 not provided SLC26A2-Related Disorders |
| Variation | info |
| Gene | SLC26A2 |
| CLNDBN | Atelosteogenesis type 2 Diastrophic dysplasia Multiple epiphyseal dysplasia 4 not provided SLC26A2-Related Disorders |
| Reversed | 0 |
| HGVS | NC_000005.9:g.149359991C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000004305.4, RCV000004306.6, RCV000004307.5, RCV000266165.1, RCV000275762.1, |
