rs104894635
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 8 | Sanfilippo syndrome type A |
(A;G) | 3 | Carrier for a Sanfilippo syndrome type A mutation |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 80213815 |
Gene | SGSH |
is a | snp |
is | mentioned by |
dbSNP | rs104894635 |
dbSNP (classic) | rs104894635 |
ClinGen | rs104894635 |
ebi | rs104894635 |
HLI | rs104894635 |
Exac | rs104894635 |
Gnomad | rs104894635 |
Varsome | rs104894635 |
LitVar | rs104894635 |
Map | rs104894635 |
PheGenI | rs104894635 |
Biobank | rs104894635 |
1000 genomes | rs104894635 |
hgdp | rs104894635 |
ensembl | rs104894635 |
geneview | rs104894635 |
scholar | rs104894635 |
rs104894635 | |
pharmgkb | rs104894635 |
gwascentral | rs104894635 |
openSNP | rs104894635 |
23andMe | rs104894635 |
SNPshot | rs104894635 |
SNPdbe | rs104894635 |
MSV3d | rs104894635 |
GWAS Ctlg | rs104894635 |
Max Magnitude | 8 |
rs104894635, also known as c.734G>A, p.Arg245His and R245H, represents a rare mutation in the SGSH gene on chromosome 17.
Although still rare, the R245H mutation is considered the most frequent of the pathogenic mutations associated with Sanfilippo syndrome type A, a recessively inherited disorder also known as mucopolysaccharidosis type IIIA (MPS3A).[PMID 21061399]
ClinVar | |
---|---|
Risk | Rs104894635(A;A) rs104894635(T;T) |
Alt | Rs104894635(A;A) rs104894635(T;T) |
Reference | Rs104894635(G;G) |
Significance | Pathogenic |
Disease | not specified Mucopolysaccharidosis not provided Sanfilippo syndrome |
Variation | info |
Gene | SGSH |
CLNDBN | not specified Mucopolysaccharidosis, MPS-III-A not provided Sanfilippo syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.78187614C>A; NC_000017.10:g.78187614C>T |
CLNSRC | HGMD OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000179273.1, RCV000005414.6, RCV000078356.4, RCV000348775.1, |