rs104894635
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 8 | Sanfilippo syndrome type A |
| (A;G) | 3 | Carrier for a Sanfilippo syndrome type A mutation |
| (G;G) | 0 | common in clinvar |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 80213815 |
| Gene | SGSH |
| is a | snp |
| is | mentioned by |
| dbSNP | rs104894635 |
| dbSNP (classic) | rs104894635 |
| ClinGen | rs104894635 |
| ebi | rs104894635 |
| HLI | rs104894635 |
| Exac | rs104894635 |
| Gnomad | rs104894635 |
| Varsome | rs104894635 |
| LitVar | rs104894635 |
| Map | rs104894635 |
| PheGenI | rs104894635 |
| Biobank | rs104894635 |
| 1000 genomes | rs104894635 |
| hgdp | rs104894635 |
| ensembl | rs104894635 |
| geneview | rs104894635 |
| scholar | rs104894635 |
| rs104894635 | |
| pharmgkb | rs104894635 |
| gwascentral | rs104894635 |
| openSNP | rs104894635 |
| 23andMe | rs104894635 |
| SNPshot | rs104894635 |
| SNPdbe | rs104894635 |
| MSV3d | rs104894635 |
| GWAS Ctlg | rs104894635 |
| Max Magnitude | 8 |
rs104894635, also known as c.734G>A, p.Arg245His and R245H, represents a rare mutation in the SGSH gene on chromosome 17.
Although still rare, the R245H mutation is considered the most frequent of the pathogenic mutations associated with Sanfilippo syndrome type A, a recessively inherited disorder also known as mucopolysaccharidosis type IIIA (MPS3A).[PMID 21061399]
| ClinVar | |
|---|---|
| Risk | Rs104894635(A;A) rs104894635(T;T) |
| Alt | Rs104894635(A;A) rs104894635(T;T) |
| Reference | Rs104894635(G;G) |
| Significance | Pathogenic |
| Disease | not specified Mucopolysaccharidosis not provided Sanfilippo syndrome |
| Variation | info |
| Gene | SGSH |
| CLNDBN | not specified Mucopolysaccharidosis, MPS-III-A not provided Sanfilippo syndrome |
| Reversed | 1 |
| HGVS | NC_000017.10:g.78187614C>A; NC_000017.10:g.78187614C>T |
| CLNSRC | HGMD OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000179273.1, RCV000005414.6, RCV000078356.4, RCV000348775.1, |
