rs10798269
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs10798269(A;A) |
| Make rs10798269(A;G) |
| Make rs10798269(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 173340574 |
| Gene | LOC100506023, TNFSF4 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10798269 |
| dbSNP (classic) | rs10798269 |
| ClinGen | rs10798269 |
| ebi | rs10798269 |
| HLI | rs10798269 |
| Exac | rs10798269 |
| Gnomad | rs10798269 |
| Varsome | rs10798269 |
| LitVar | rs10798269 |
| Map | rs10798269 |
| PheGenI | rs10798269 |
| Biobank | rs10798269 |
| 1000 genomes | rs10798269 |
| hgdp | rs10798269 |
| ensembl | rs10798269 |
| geneview | rs10798269 |
| scholar | rs10798269 |
| rs10798269 | |
| pharmgkb | rs10798269 |
| gwascentral | rs10798269 |
| openSNP | rs10798269 |
| 23andMe | rs10798269 |
| SNPshot | rs10798269 |
| SNPdbe | rs10798269 |
| MSV3d | rs10798269 |
| GWAS Ctlg | rs10798269 |
| GMAF | 0.3678 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
One of several SNPs found in a study of ~2,5720 female patients of European ancestry to be associated with systemic lupus erythematosus.[PMID 18204446
]
| GWAS | |
|---|---|
| SNP | rs10798269 |
| PubMedID | [PMID 18204446]
|
| Condition | Systemic lupus erythematosus in women |
| Gene | Intergenic |
| Risk Allele | |
| pValue | 1.00E-007 |
| OR | 1.22 |
| 95% CI | 1.14-1.32 |
[PMID 19714582] Rheumatoid arthritis does not share most of the newly identified systemic lupus erythematosus genetic factors
[PMID 19341491] Genome-based prediction of common diseases: methodological considerations for future research.
[PMID 19442287] Replication of recently identified systemic lupus erythematosus genetic associations: a case-control study.
