rs11090865
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| (G;T) | 2.3 | Carrier of a deafness-related modifier variant |
| (T;T) | 3 | Modifier variant; some impact in rare cases |
| Reference | GRCh38 38.1/141 |
| Chromosome | 22 |
| Position | 46335792 |
| Gene | TRMU |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11090865 |
| dbSNP (classic) | rs11090865 |
| ClinGen | rs11090865 |
| ebi | rs11090865 |
| HLI | rs11090865 |
| Exac | rs11090865 |
| Gnomad | rs11090865 |
| Varsome | rs11090865 |
| LitVar | rs11090865 |
| Map | rs11090865 |
| PheGenI | rs11090865 |
| Biobank | rs11090865 |
| 1000 genomes | rs11090865 |
| hgdp | rs11090865 |
| ensembl | rs11090865 |
| geneview | rs11090865 |
| scholar | rs11090865 |
| rs11090865 | |
| pharmgkb | rs11090865 |
| gwascentral | rs11090865 |
| openSNP | rs11090865 |
| 23andMe | rs11090865 |
| SNPshot | rs11090865 |
| SNPdbe | rs11090865 |
| MSV3d | rs11090865 |
| GWAS Ctlg | rs11090865 |
| GMAF | 0.1088 |
| Max Magnitude | 3 |
This SNP, also known as c.28G>T, p.Ala10Ser or A10S, represents a variant in the TRMU gene on chromosome 22.
Individuals who are homozygous TRMU A10S (i.e. rs11090865(T;T)) *AND* who also carry the mtDNA A1555G mutation (rs267606617(G)) exhibit prelingual profound deafness.[PMID 16826519
]
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| ClinVar | |
|---|---|
| Risk | Rs11090865(T;T) |
| Alt | Rs11090865(T;T) |
| Reference | Rs11090865(G;G) |
| Significance | Other |
| Disease | Deafness not specified Liver failure acute infantile |
| Variation | info |
| Gene | TRMU |
| CLNDBN | Deafness, mitochondrial, modifier of not specified Liver failure acute infantile |
| Reversed | 0 |
| HGVS | NC_000022.10:g.46731689G>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000001353.3, RCV000173461.2, RCV000295210.1, |
