rs111033253
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (-;AAGTTCATCAAGGG) | 3 | Carrier of a recessive deafness mutation |
| (AAGTTCATCAAGGG;AAGTTCATCAAGGG) | 0 | common in clinvar |
| Make rs111033253(-;-) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 20189256 |
| Gene | GJB2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs111033253 |
| dbSNP (classic) | rs111033253 |
| ClinGen | rs111033253 |
| ebi | rs111033253 |
| HLI | rs111033253 |
| Exac | rs111033253 |
| Gnomad | rs111033253 |
| Varsome | rs111033253 |
| LitVar | rs111033253 |
| Map | rs111033253 |
| PheGenI | rs111033253 |
| Biobank | rs111033253 |
| 1000 genomes | rs111033253 |
| hgdp | rs111033253 |
| ensembl | rs111033253 |
| geneview | rs111033253 |
| scholar | rs111033253 |
| rs111033253 | |
| pharmgkb | rs111033253 |
| gwascentral | rs111033253 |
| openSNP | rs111033253 |
| 23andMe | rs111033253 |
| SNPshot | rs111033253 |
| SNPdbe | rs111033253 |
| MSV3d | rs111033253 |
| GWAS Ctlg | rs111033253 |
| Max Magnitude | 3 |
| ClinVar | |
|---|---|
| Risk | rs111033253(-;-) |
| Alt | rs111033253(-;-) |
| Reference | Rs111033253(AAGTTCATCAAGGG;AAGTTCATCAAGGG) |
| Significance | Pathogenic |
| Disease | Deafness not provided Hearing impairment Nonsyndromic hearing loss and deafness |
| Variation | info |
| Gene | GJB2 |
| CLNDBN | Deafness, autosomal recessive 1A not provided Hearing impairment Nonsyndromic hearing loss and deafness |
| Reversed | 1 |
| HGVS | NC_000013.10:g.20763395_20763408delCCCTTGATGAACTT |
| CLNSRC | HGMD OMIM Allelic Variant |
| CLNACC | RCV000037836.6, RCV000080370.4, RCV000146016.1, RCV000211774.1, |
[PMID 16379] Cation binding by tobacco mosaic virus.
[PMID 11551103] High frequency of GJB2 gene mutations in Polish patients with prelingual nonsyndromic deafness.
[PMID 12112666] Frequencies of GJB2 mutations in German control individuals and patients showing sporadic non-syndromic hearing impairment.
[PMID 15146474] GJB2 mutations in patients with non-syndromic hearing loss from Northeastern Hungary.
[PMID 15253766] Spectrum and frequencies of mutations in the GJB2 (Cx26) gene among 156 Czech patients with pre-lingual deafness.
[PMID 15967879] GJB2 and GJB6 mutations: genotypic and phenotypic correlations in a large cohort of hearing-impaired patients.
