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rs111033623

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in clinvar
(C;T) 5 Carrier of an X-linked mutation for lymphoproliferative syndrome 1
(T;T) 8.8 Lymphoproliferative syndrome 1 (predicted)
ReferenceGRCh38 38.1/141
ChromosomeX
Position124365786
GeneSH2D1A
is asnp
is mentioned by
dbSNPrs111033623
dbSNP (classic)rs111033623
ClinGenrs111033623
ebirs111033623
HLIrs111033623
Exacrs111033623
Gnomadrs111033623
Varsomers111033623
LitVarrs111033623
Maprs111033623
PheGenIrs111033623
Biobankrs111033623
1000 genomesrs111033623
hgdprs111033623
ensemblrs111033623
geneviewrs111033623
scholarrs111033623
googlers111033623
pharmgkbrs111033623
gwascentralrs111033623
openSNPrs111033623
23andMers111033623
SNPshotrs111033623
SNPdbers111033623
MSV3drs111033623
GWAS Ctlgrs111033623
Max Magnitude8.8

aka c.163C>T (p.Arg55Ter)

considered pathogenic for X-linked Lymphoproliferative syndrome, type 1 in ClinVar

OMIM300490
Desc
Variant0001
Relatedalso
ClinVar
Risk Rs111033623(T;T)
Alt Rs111033623(T;T)
Reference Rs111033623(C;C)
Significance Pathogenic
Disease Lymphoproliferative syndrome 1
Variation info
Gene SH2D1A
CLNDBN Lymphoproliferative syndrome 1, X-linked
Reversed 0
HGVS NC_000023.10:g.123499636C>T
CLNSRC OMIM Allelic Variant
CLNACC RCV000011645.2,