rs111033623
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 5 | Carrier of an X-linked mutation for lymphoproliferative syndrome 1 |
(T;T) | 8.8 | Lymphoproliferative syndrome 1 (predicted) |
Reference | GRCh38 38.1/141 |
Chromosome | X |
Position | 124365786 |
Gene | SH2D1A |
is a | snp |
is | mentioned by |
dbSNP | rs111033623 |
dbSNP (classic) | rs111033623 |
ClinGen | rs111033623 |
ebi | rs111033623 |
HLI | rs111033623 |
Exac | rs111033623 |
Gnomad | rs111033623 |
Varsome | rs111033623 |
LitVar | rs111033623 |
Map | rs111033623 |
PheGenI | rs111033623 |
Biobank | rs111033623 |
1000 genomes | rs111033623 |
hgdp | rs111033623 |
ensembl | rs111033623 |
geneview | rs111033623 |
scholar | rs111033623 |
rs111033623 | |
pharmgkb | rs111033623 |
gwascentral | rs111033623 |
openSNP | rs111033623 |
23andMe | rs111033623 |
SNPshot | rs111033623 |
SNPdbe | rs111033623 |
MSV3d | rs111033623 |
GWAS Ctlg | rs111033623 |
Max Magnitude | 8.8 |
aka c.163C>T (p.Arg55Ter)
considered pathogenic for X-linked Lymphoproliferative syndrome, type 1 in ClinVar
ClinVar | |
---|---|
Risk | Rs111033623(T;T) |
Alt | Rs111033623(T;T) |
Reference | Rs111033623(C;C) |
Significance | Pathogenic |
Disease | Lymphoproliferative syndrome 1 |
Variation | info |
Gene | SH2D1A |
CLNDBN | Lymphoproliferative syndrome 1, X-linked |
Reversed | 0 |
HGVS | NC_000023.10:g.123499636C>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000011645.2, |