rs111033690
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in complete genomics |
(C;T) | 3 | Carrier of a GALT gene mutation |
(T;T) | 8 | Galactosemia (predicted); see discussion |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 34647858 |
Gene | GALT |
is a | snp |
is | mentioned by |
dbSNP | rs111033690 |
dbSNP (classic) | rs111033690 |
ClinGen | rs111033690 |
ebi | rs111033690 |
HLI | rs111033690 |
Exac | rs111033690 |
Gnomad | rs111033690 |
Varsome | rs111033690 |
LitVar | rs111033690 |
Map | rs111033690 |
PheGenI | rs111033690 |
Biobank | rs111033690 |
1000 genomes | rs111033690 |
hgdp | rs111033690 |
ensembl | rs111033690 |
geneview | rs111033690 |
scholar | rs111033690 |
rs111033690 | |
pharmgkb | rs111033690 |
gwascentral | rs111033690 |
openSNP | rs111033690 |
23andMe | rs111033690 |
SNPshot | rs111033690 |
SNPdbe | rs111033690 |
MSV3d | rs111033690 |
GWAS Ctlg | rs111033690 |
GMAF | 0.001837 |
Max Magnitude | 8 |
rs111033690, also known as c.404C>T, p.Ser135Leu and S135L, represents a variant in the GALT gene on chromosome 9.
The rs111033690(T) allele is considered a pathogenic mutation associated with galactosemia, a recessively inherited disorder typically first diagnosed in newborns. This mutation has been reported as occurring only in individuals of African descent.
23andMe name for c.404C>T: i5002975
ClinVar | |
---|---|
Risk | rs111033690(G;G) Rs111033690(T;T) |
Alt | rs111033690(G;G) Rs111033690(T;T) |
Reference | Rs111033690(C;C) |
Significance | Other |
Disease | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
Variation | info |
Gene | GALT |
CLNDBN | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
Reversed | 0 |
HGVS | NC_000009.11:g.34647855C>G; NC_000009.11:g.34647855C>T |
CLNSRC | UniProtKB (protein) HGMD OMIM Allelic Variant |
CLNACC | RCV000022105.3, RCV000003802.6, RCV000185915.2, |