rs111033690
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in complete genomics |
| (C;T) | 3 | Carrier of a GALT gene mutation |
| (T;T) | 8 | Galactosemia (predicted); see discussion |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 34647858 |
| Gene | GALT |
| is a | snp |
| is | mentioned by |
| dbSNP | rs111033690 |
| dbSNP (classic) | rs111033690 |
| ClinGen | rs111033690 |
| ebi | rs111033690 |
| HLI | rs111033690 |
| Exac | rs111033690 |
| Gnomad | rs111033690 |
| Varsome | rs111033690 |
| LitVar | rs111033690 |
| Map | rs111033690 |
| PheGenI | rs111033690 |
| Biobank | rs111033690 |
| 1000 genomes | rs111033690 |
| hgdp | rs111033690 |
| ensembl | rs111033690 |
| geneview | rs111033690 |
| scholar | rs111033690 |
| rs111033690 | |
| pharmgkb | rs111033690 |
| gwascentral | rs111033690 |
| openSNP | rs111033690 |
| 23andMe | rs111033690 |
| SNPshot | rs111033690 |
| SNPdbe | rs111033690 |
| MSV3d | rs111033690 |
| GWAS Ctlg | rs111033690 |
| GMAF | 0.001837 |
| Max Magnitude | 8 |
rs111033690, also known as c.404C>T, p.Ser135Leu and S135L, represents a variant in the GALT gene on chromosome 9.
The rs111033690(T) allele is considered a pathogenic mutation associated with galactosemia, a recessively inherited disorder typically first diagnosed in newborns. This mutation has been reported as occurring only in individuals of African descent.
23andMe name for c.404C>T: i5002975
| ClinVar | |
|---|---|
| Risk | rs111033690(G;G) Rs111033690(T;T) |
| Alt | rs111033690(G;G) Rs111033690(T;T) |
| Reference | Rs111033690(C;C) |
| Significance | Other |
| Disease | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
| Variation | info |
| Gene | GALT |
| CLNDBN | Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided |
| Reversed | 0 |
| HGVS | NC_000009.11:g.34647855C>G; NC_000009.11:g.34647855C>T |
| CLNSRC | UniProtKB (protein) HGMD OMIM Allelic Variant |
| CLNACC | RCV000022105.3, RCV000003802.6, RCV000185915.2, |
