rs11168048
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs11168048(C;C) |
| Make rs11168048(C;T) |
| Make rs11168048(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 5 |
| Position | 148462790 |
| Gene | HTR4, LOC107986462 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11168048 |
| dbSNP (classic) | rs11168048 |
| ClinGen | rs11168048 |
| ebi | rs11168048 |
| HLI | rs11168048 |
| Exac | rs11168048 |
| Gnomad | rs11168048 |
| Varsome | rs11168048 |
| LitVar | rs11168048 |
| Map | rs11168048 |
| PheGenI | rs11168048 |
| Biobank | rs11168048 |
| 1000 genomes | rs11168048 |
| hgdp | rs11168048 |
| ensembl | rs11168048 |
| geneview | rs11168048 |
| scholar | rs11168048 |
| rs11168048 | |
| pharmgkb | rs11168048 |
| gwascentral | rs11168048 |
| openSNP | rs11168048 |
| 23andMe | rs11168048 |
| SNPshot | rs11168048 |
| SNPdbe | rs11168048 |
| MSV3d | rs11168048 |
| GWAS Ctlg | rs11168048 |
| GMAF | 0.4591 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20010835 ]
|
| Trait | Pulmonary function |
| Title | Meta-analyses of genome-wide assocation studies identify multiple loci associated with pulmonary function |
| Risk Allele | T |
| P-val | 1E-11 |
| Odds Ratio | 0.40 [NR] % decrease |
[PMID 21304900] Individual and cumulative effects of GWAS susceptibility loci in lung cancer: associations after sub-phenotyping for COPD.
| GWAS snp | |
|---|---|
| PMID | [PMID 23284291]
|
| Trait | Pulmonary function (interaction) |
| Title | Genome-wide joint meta-analysis of SNP and SNP-by-smoking interaction identifies novel loci for pulmonary function. |
| Risk Allele | |
| P-val | 5E-17 |
| Odds Ratio | NR NR |
[PMID 24951661] ADAM19 and HTR4 Variants and Pulmonary Function: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study
