rs11558538
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common on affy axiom data |
| Make rs11558538(C;T) |
| Make rs11558538(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 138002079 |
| Gene | HNMT, LOC107985948 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11558538 |
| dbSNP (classic) | rs11558538 |
| ClinGen | rs11558538 |
| ebi | rs11558538 |
| HLI | rs11558538 |
| Exac | rs11558538 |
| Gnomad | rs11558538 |
| Varsome | rs11558538 |
| LitVar | rs11558538 |
| Map | rs11558538 |
| PheGenI | rs11558538 |
| Biobank | rs11558538 |
| 1000 genomes | rs11558538 |
| hgdp | rs11558538 |
| ensembl | rs11558538 |
| geneview | rs11558538 |
| scholar | rs11558538 |
| rs11558538 | |
| pharmgkb | rs11558538 |
| gwascentral | rs11558538 |
| openSNP | rs11558538 |
| 23andMe | rs11558538 |
| SNPshot | rs11558538 |
| SNPdbe | rs11558538 |
| MSV3d | rs11558538 |
| GWAS Ctlg | rs11558538 |
| Merged from | Rs1801105 |
| GMAF | 0.05601 |
| Max Magnitude | 0 |
[PMID 19773194
] Histamine N-methyltransferase Thr105Ile is not associated with Parkinson's disease or essential tremor
| ? | (C;C) (C;T) (T;T) | |
|---|---|---|
|
| ||
| ClinVar | |
|---|---|
| Risk | rs11558538(T;T) |
| Alt | rs11558538(T;T) |
| Reference | Rs11558538(C;C) |
| Significance | Other |
| Disease | Asthma |
| Variation | info |
| Gene | HNMT |
| CLNDBN | Asthma, susceptibility to |
| Reversed | 0 |
| HGVS | NC_000002.11:g.138759649C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000005467.2, |
[PMID 27399132] Thr105Ile (rs11558538) polymorphism in the histamine N-methyltransferase (HNMT) gene and risk for Parkinson disease: A PRISMA-compliant systematic review and meta-analysis.
[PMID 27837280] Thr105Ile (rs11558538) polymorphism in the histamine-1-methyl-transferase (HNMT) gene and risk for restless legs syndrome.
