rs11622475
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 1.5x risk of bipolar disorder | |
| (C;T) | 1.1x risk of bipolar disorder | |
| (T;T) | 0 | normal |
| Reference | GRCh38 38.1/141 |
| Chromosome | 14 |
| Position | 104042739 |
| Gene | TDRD9 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11622475 |
| dbSNP (classic) | rs11622475 |
| ClinGen | rs11622475 |
| ebi | rs11622475 |
| HLI | rs11622475 |
| Exac | rs11622475 |
| Gnomad | rs11622475 |
| Varsome | rs11622475 |
| LitVar | rs11622475 |
| Map | rs11622475 |
| PheGenI | rs11622475 |
| Biobank | rs11622475 |
| 1000 genomes | rs11622475 |
| hgdp | rs11622475 |
| ensembl | rs11622475 |
| geneview | rs11622475 |
| scholar | rs11622475 |
| rs11622475 | |
| pharmgkb | rs11622475 |
| gwascentral | rs11622475 |
| openSNP | rs11622475 |
| 23andMe | rs11622475 |
| SNPshot | rs11622475 |
| SNPdbe | rs11622475 |
| MSV3d | rs11622475 |
| GWAS Ctlg | rs11622475 |
| GMAF | 0.2314 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
rs11622475 has been reported in a large study to be associated with bipolar disorder.
The risk allele (oriented to the dbSNP entry) is (C); the odds ratio associated with heterozygotes is 1.13 (CI 0.89-1.44), and for homozygotes, 1.47 (CI 1.17-1.86). [PMID 17554300
]
| GWAS snp | |
|---|---|
| PMID | [PMID 21254220]
|
| Trait | |
| Title | Propensity score-based nonparametric test revealing genetic variants underlying bipolar disorder. |
| Risk Allele | |
| P-val | 0.000002 |
| Odds Ratio | None None |
[PMID 19308021] Findings from bipolar disorder genome-wide association studies replicate in a Finnish bipolar family-cohort.
