rs118203997
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 7 | Fanconi anemia, complementation group N |
| (A;T) | 5 | PALB2-related cancer risk |
| (T;T) | 0 | common in clinvar |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 23634893 |
| Gene | PALB2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs118203997 |
| dbSNP (classic) | rs118203997 |
| ClinGen | rs118203997 |
| ebi | rs118203997 |
| HLI | rs118203997 |
| Exac | rs118203997 |
| Gnomad | rs118203997 |
| Varsome | rs118203997 |
| LitVar | rs118203997 |
| Map | rs118203997 |
| PheGenI | rs118203997 |
| Biobank | rs118203997 |
| 1000 genomes | rs118203997 |
| hgdp | rs118203997 |
| ensembl | rs118203997 |
| geneview | rs118203997 |
| scholar | rs118203997 |
| rs118203997 | |
| pharmgkb | rs118203997 |
| gwascentral | rs118203997 |
| openSNP | rs118203997 |
| 23andMe | rs118203997 |
| SNPshot | rs118203997 |
| SNPdbe | rs118203997 |
| MSV3d | rs118203997 |
| GWAS Ctlg | rs118203997 |
| Max Magnitude | 7 |
| ClinVar | |
|---|---|
| Risk | Rs118203997(A;A) rs118203997(C;C) |
| Alt | Rs118203997(A;A) rs118203997(C;C) |
| Reference | Rs118203997(T;T) |
| Significance | Pathogenic |
| Disease | Hereditary cancer-predisposing syndrome Fanconi anemia not provided Familial cancer of breast |
| Variation | info |
| Gene | PALB2 |
| CLNDBN | Hereditary cancer-predisposing syndrome Fanconi anemia, complementation group N not provided Familial cancer of breast |
| Reversed | 1 |
| HGVS | NC_000016.9:g.23646214A>G; NC_000016.9:g.23646214A>T |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000219143.1, RCV000001302.2, RCV000217204.1, RCV000235772.2, RCV000476387.1, |
[PMID 21285249
] Contribution of inherited mutations in the BRCA2-interacting protein PALB2 to familial breast cancer.
