rs120074180
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 5 | Romano-Ward Long QT Syndrome |
Make rs120074180(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 2572882 |
Gene | KCNQ1 |
is a | snp |
is | mentioned by |
dbSNP | rs120074180 |
dbSNP (classic) | rs120074180 |
ClinGen | rs120074180 |
ebi | rs120074180 |
HLI | rs120074180 |
Exac | rs120074180 |
Gnomad | rs120074180 |
Varsome | rs120074180 |
LitVar | rs120074180 |
Map | rs120074180 |
PheGenI | rs120074180 |
Biobank | rs120074180 |
1000 genomes | rs120074180 |
hgdp | rs120074180 |
ensembl | rs120074180 |
geneview | rs120074180 |
scholar | rs120074180 |
rs120074180 | |
pharmgkb | rs120074180 |
gwascentral | rs120074180 |
openSNP | rs120074180 |
23andMe | rs120074180 |
SNPshot | rs120074180 |
SNPdbe | rs120074180 |
MSV3d | rs120074180 |
GWAS Ctlg | rs120074180 |
Max Magnitude | 5 |
ClinVar | |
---|---|
Risk | rs120074180(T;T) |
Alt | rs120074180(T;T) |
Reference | Rs120074180(C;C) |
Significance | Pathogenic |
Disease | Long QT syndrome 1 Long QT syndrome Congenital long QT syndrome not provided |
Variation | info |
Gene | KCNQ1 |
CLNDBN | Long QT syndrome 1 Long QT syndrome, LQT1 subtype Congenital long QT syndrome not provided |
Reversed | 0 |
HGVS | NC_000011.9:g.2594112C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000003266.3, RCV000046135.2, RCV000057769.3, RCV000182120.4, |
[PMID 1584047] Simultaneous analysis for testing of models and parameter estimation.
[PMID 8528244] Positional cloning of a novel potassium channel gene: KVLQT1 mutations cause cardiac arrhythmias.
[PMID 9323054] Dominant-negative KvLQT1 mutations underlie the LQT1 form of long QT syndrome.
[PMID 10973849] Spectrum of mutations in long-QT syndrome genes. KVLQT1, HERG, SCN5A, KCNE1, and KCNE2.
[PMID 11216980] A founder mutation of the potassium channel KCNQ1 in long QT syndrome: implications for estimation of disease prevalence and molecular diagnostics.
[PMID 14678125] Location of mutation in the KCNQ1 and phenotypic presentation of long QT syndrome.