rs120074180
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 5 | Romano-Ward Long QT Syndrome |
| Make rs120074180(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 2572882 |
| Gene | KCNQ1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs120074180 |
| dbSNP (classic) | rs120074180 |
| ClinGen | rs120074180 |
| ebi | rs120074180 |
| HLI | rs120074180 |
| Exac | rs120074180 |
| Gnomad | rs120074180 |
| Varsome | rs120074180 |
| LitVar | rs120074180 |
| Map | rs120074180 |
| PheGenI | rs120074180 |
| Biobank | rs120074180 |
| 1000 genomes | rs120074180 |
| hgdp | rs120074180 |
| ensembl | rs120074180 |
| geneview | rs120074180 |
| scholar | rs120074180 |
| rs120074180 | |
| pharmgkb | rs120074180 |
| gwascentral | rs120074180 |
| openSNP | rs120074180 |
| 23andMe | rs120074180 |
| SNPshot | rs120074180 |
| SNPdbe | rs120074180 |
| MSV3d | rs120074180 |
| GWAS Ctlg | rs120074180 |
| Max Magnitude | 5 |
| ClinVar | |
|---|---|
| Risk | rs120074180(T;T) |
| Alt | rs120074180(T;T) |
| Reference | Rs120074180(C;C) |
| Significance | Pathogenic |
| Disease | Long QT syndrome 1 Long QT syndrome Congenital long QT syndrome not provided |
| Variation | info |
| Gene | KCNQ1 |
| CLNDBN | Long QT syndrome 1 Long QT syndrome, LQT1 subtype Congenital long QT syndrome not provided |
| Reversed | 0 |
| HGVS | NC_000011.9:g.2594112C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000003266.3, RCV000046135.2, RCV000057769.3, RCV000182120.4, |
[PMID 1584047] Simultaneous analysis for testing of models and parameter estimation.
[PMID 8528244] Positional cloning of a novel potassium channel gene: KVLQT1 mutations cause cardiac arrhythmias.
[PMID 9323054] Dominant-negative KvLQT1 mutations underlie the LQT1 form of long QT syndrome.
[PMID 10973849] Spectrum of mutations in long-QT syndrome genes. KVLQT1, HERG, SCN5A, KCNE1, and KCNE2.
[PMID 11216980] A founder mutation of the potassium channel KCNQ1 in long QT syndrome: implications for estimation of disease prevalence and molecular diagnostics.
[PMID 14678125] Location of mutation in the KCNQ1 and phenotypic presentation of long QT syndrome.
