rs121908027
From SNPedia
					| Orientation | plus | 
| Stabilized | plus | 
| Geno | Mag | Summary | 
|---|---|---|
| (-;-) | 7 | familial hypercholesterolemia | 
| (-;GGT) | 3.5 | familial hypercholesterolemia | 
| (-;TGG) | 5 | Familial Hypercholesterolemia | 
| (GGT;GGT) | 0 | common in complete genomics | 
| (TGG;TGG) | 0 | common in clinvar | 
| Reference | GRCh38 38.1/141 | 
| Chromosome | 19 | 
| Position | 11105558 | 
| Gene | LDLR | 
| is a | snp | 
| is | mentioned by | 
| dbSNP | rs121908027 | 
| dbSNP (classic) | rs121908027 | 
| ClinGen | rs121908027 | 
| ebi | rs121908027 | 
| HLI | rs121908027 | 
| Exac | rs121908027 | 
| Gnomad | rs121908027 | 
| Varsome | rs121908027 | 
| LitVar | rs121908027 | 
| Map | rs121908027 | 
| PheGenI | rs121908027 | 
| Biobank | rs121908027 | 
| 1000 genomes | rs121908027 | 
| hgdp | rs121908027 | 
| ensembl | rs121908027 | 
| geneview | rs121908027 | 
| scholar | rs121908027 | 
| rs121908027 | |
| pharmgkb | rs121908027 | 
| gwascentral | rs121908027 | 
| openSNP | rs121908027 | 
| 23andMe | rs121908027 | 
| SNPshot | rs121908027 | 
| SNPdbe | rs121908027 | 
| MSV3d | rs121908027 | 
| GWAS Ctlg | rs121908027 | 
| Max Magnitude | 7 | 
rs121908027, also known as 652delGGT, G197del, among other terms, is a mutation in the LDLR gene on chromosome 19. This mutation is known as FH Lithuania, since it appears to be a founder mutation for familial hypercholesterolemia originating in the 14th century. It is reported to the be most common FH mutation in Ashkenazi Jews, found in up to 35% of FH families in Israel.[PMID 1867200 ]
]
rs121908027 is named i4000356 in 23andMe data.
| ClinVar | |
|---|---|
| Risk | Rs121908027(-;-) Rs121908027(TGG;TGG) | 
| Alt | Rs121908027(-;-) Rs121908027(TGG;TGG) | 
| Reference | Rs121908027(GGT;GGT) | 
| Significance | Other | 
| Disease | Familial hypercholesterolemia not provided | 
| Variation | info | 
| Gene | LDLR | 
| CLNDBN | Familial hypercholesterolemia not provided | 
| Reversed | 0 | 
| HGVS | NC_000019.9:g.11216236_11216238delTGG | 
| CLNSRC | LDLR @ LOVD OMIM Allelic Variant | 
| CLNACC | RCV000211647.5, RCV000489033.1, | 


