rs121918003
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 4 | hypophosphatasia |
(C;G) | 3 | carrier of a hypophosphatasia allele |
(G;G) | 0 | normal |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 21561127 |
Gene | ALPL |
is a | snp |
is | mentioned by |
dbSNP | rs121918003 |
dbSNP (classic) | rs121918003 |
ClinGen | rs121918003 |
ebi | rs121918003 |
HLI | rs121918003 |
Exac | rs121918003 |
Gnomad | rs121918003 |
Varsome | rs121918003 |
LitVar | rs121918003 |
Map | rs121918003 |
PheGenI | rs121918003 |
Biobank | rs121918003 |
1000 genomes | rs121918003 |
hgdp | rs121918003 |
ensembl | rs121918003 |
geneview | rs121918003 |
scholar | rs121918003 |
rs121918003 | |
pharmgkb | rs121918003 |
gwascentral | rs121918003 |
openSNP | rs121918003 |
23andMe | rs121918003 |
SNPshot | rs121918003 |
SNPdbe | rs121918003 |
MSV3d | rs121918003 |
GWAS Ctlg | rs121918003 |
Max Magnitude | 4 |
rs121918003, also known as c.212G>C or p.R71P, is a SNP in the ALPL gene on chromosome 1.
Based on the ALPL gene mutations database, the rare/minor allele is considered pathogenic for the perinatal form of hypophosphatasia.
This SNP is referred to as i5002772 by 23andMe.
ClinVar | |
---|---|
Risk | rs121918003(A;A) Rs121918003(C;C) |
Alt | rs121918003(A;A) Rs121918003(C;C) |
Reference | Rs121918003(G;G) |
Significance | Pathogenic |
Disease | Infantile hypophosphatasia |
Variation | info |
Gene | ALPL |
CLNDBN | Infantile hypophosphatasia |
Reversed | 0 |
HGVS | NC_000001.10:g.21887620G>C |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000014653.19, |