rs121964856
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;G) | 6 | Familial hypertrophic cardiomyopathy (possible) |
| (C;T) | 7 | Hypertrophic Cardiomyopathy |
| (G;G) | 0 | common in clinvar |
| Make rs121964856(A;A) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 201365297 |
| Gene | TNNT2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs121964856 |
| dbSNP (classic) | rs121964856 |
| ClinGen | rs121964856 |
| ebi | rs121964856 |
| HLI | rs121964856 |
| Exac | rs121964856 |
| Gnomad | rs121964856 |
| Varsome | rs121964856 |
| LitVar | rs121964856 |
| Map | rs121964856 |
| PheGenI | rs121964856 |
| Biobank | rs121964856 |
| 1000 genomes | rs121964856 |
| hgdp | rs121964856 |
| ensembl | rs121964856 |
| geneview | rs121964856 |
| scholar | rs121964856 |
| rs121964856 | |
| pharmgkb | rs121964856 |
| gwascentral | rs121964856 |
| openSNP | rs121964856 |
| 23andMe | rs121964856 |
| SNPshot | rs121964856 |
| SNPdbe | rs121964856 |
| MSV3d | rs121964856 |
| GWAS Ctlg | rs121964856 |
| Max Magnitude | 7 |
The rare minor allele of this variant is reported to be pathogenic/likely pathogenic for familial hypertrophic cardiomyopathy (HCM), according to [PMID 25611685
].
| ClinVar | |
|---|---|
| Risk | rs121964856(A;A) rs121964856(T;T) |
| Alt | rs121964856(A;A) rs121964856(T;T) |
| Reference | Rs121964856(G;G) |
| Significance | Other |
| Disease | not provided Familial hypertrophic cardiomyopathy 2 Primary familial hypertrophic cardiomyopathy |
| Variation | info |
| Gene | TNNT2 |
| CLNDBN | not provided Familial hypertrophic cardiomyopathy 2 Primary familial hypertrophic cardiomyopathy |
| Reversed | 1 |
| HGVS | NC_000001.10:g.201334425C>A; NC_000001.10:g.201334425C>T |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000223821.1, RCV000013220.21, RCV000159281.4, RCV000211865.1, |
