rs12476364
From SNPedia
					| Orientation | plus | 
| Stabilized | plus | 
| Geno | Mag | Summary | 
|---|---|---|
| (A;G) | 6 | Lynch syndrome, pathogenic mutation | 
| (C;G) | 6 | Lynch syndrome, pathogenic mutation | 
| (G;G) | 0 | common in clinvar | 
| (G;T) | 6 | Lynch syndrome | 
| Make rs12476364(A;A) | 
| Reference | GRCh38 38.1/141 | 
| Chromosome | 2 | 
| Position | 47416295 | 
| Gene | MSH2 | 
| is a | snp | 
| is | mentioned by | 
| dbSNP | rs12476364 | 
| dbSNP (classic) | rs12476364 | 
| ClinGen | rs12476364 | 
| ebi | rs12476364 | 
| HLI | rs12476364 | 
| Exac | rs12476364 | 
| Gnomad | rs12476364 | 
| Varsome | rs12476364 | 
| LitVar | rs12476364 | 
| Map | rs12476364 | 
| PheGenI | rs12476364 | 
| Biobank | rs12476364 | 
| 1000 genomes | rs12476364 | 
| hgdp | rs12476364 | 
| ensembl | rs12476364 | 
| geneview | rs12476364 | 
| scholar | rs12476364 | 
| rs12476364 | |
| pharmgkb | rs12476364 | 
| gwascentral | rs12476364 | 
| openSNP | rs12476364 | 
| 23andMe | rs12476364 | 
| SNPshot | rs12476364 | 
| SNPdbe | rs12476364 | 
| MSV3d | rs12476364 | 
| GWAS Ctlg | rs12476364 | 
| Max Magnitude | 6 | 
| ? | (A;A) (A;G) (G;G) | 28 | 
|---|---|---|
| 
 
 
  | ||
| ClinVar | |
|---|---|
| Risk | rs12476364(A;A) rs12476364(C;C) rs12476364(T;T) | 
| Alt | rs12476364(A;A) rs12476364(C;C) rs12476364(T;T) | 
| Reference | Rs12476364(G;G) | 
| Significance | Pathogenic | 
| Disease | Lynch syndrome Hereditary cancer-predisposing syndrome | 
| Variation | info | 
| Gene | MSH2 | 
| CLNDBN | Lynch syndrome Hereditary cancer-predisposing syndrome | 
| Reversed | 0 | 
| HGVS | NC_000002.11:g.47643434G>A; NC_000002.11:g.47643434G>C; NC_000002.11:g.47643434G>T | 
| CLNSRC | International Society for Gastrointestinal Hereditary Tumours | 
| CLNACC | RCV000076757.2, RCV000076758.2, RCV000491758.1, RCV000468897.1, RCV000491423.1, | 
