rs13021401
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs13021401(C;C) |
| Make rs13021401(C;T) |
| Make rs13021401(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 20488758 |
| Gene | LOC107985856 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs13021401 |
| dbSNP (classic) | rs13021401 |
| ClinGen | rs13021401 |
| ebi | rs13021401 |
| HLI | rs13021401 |
| Exac | rs13021401 |
| Gnomad | rs13021401 |
| Varsome | rs13021401 |
| LitVar | rs13021401 |
| Map | rs13021401 |
| PheGenI | rs13021401 |
| Biobank | rs13021401 |
| 1000 genomes | rs13021401 |
| hgdp | rs13021401 |
| ensembl | rs13021401 |
| geneview | rs13021401 |
| scholar | rs13021401 |
| rs13021401 | |
| pharmgkb | rs13021401 |
| gwascentral | rs13021401 |
| openSNP | rs13021401 |
| 23andMe | rs13021401 |
| SNPshot | rs13021401 |
| SNPdbe | rs13021401 |
| MSV3d | rs13021401 |
| GWAS Ctlg | rs13021401 |
| GMAF | 0.3113 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 21750679 ]
|
| Trait | |
| Title | Genome-wide scan identifies TNIP1, PSORS1C1, and RHOB as novel risk loci for systemic sclerosis. |
| Risk Allele | T |
| P-val | 0.000003 |
| Odds Ratio | 1.2100 [1.12-1.31] |
[PMID 22896740] Confirmation of TNIP1 but not RHOB and PSORS1C1 as systemic sclerosis risk factors in a large independent replication study
