rs137852949
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 3 | carrier of an autosomal recessive polycystic kidney disease mutation |
| (T;T) | 6 | Polycystic Kidney disease |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 52058349 |
| Gene | PKHD1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs137852949 |
| dbSNP (classic) | rs137852949 |
| ClinGen | rs137852949 |
| ebi | rs137852949 |
| HLI | rs137852949 |
| Exac | rs137852949 |
| Gnomad | rs137852949 |
| Varsome | rs137852949 |
| LitVar | rs137852949 |
| Map | rs137852949 |
| PheGenI | rs137852949 |
| Biobank | rs137852949 |
| 1000 genomes | rs137852949 |
| hgdp | rs137852949 |
| ensembl | rs137852949 |
| geneview | rs137852949 |
| scholar | rs137852949 |
| rs137852949 | |
| pharmgkb | rs137852949 |
| gwascentral | rs137852949 |
| openSNP | rs137852949 |
| 23andMe | rs137852949 |
| SNPshot | rs137852949 |
| SNPdbe | rs137852949 |
| MSV3d | rs137852949 |
| GWAS Ctlg | rs137852949 |
| Max Magnitude | 6 |
rs137852949, also known as c.1486C>T or p.Arg496Ter, is a SNP in the PKHD1 gene on chromosome 6.
The risk allele, rs199531851(T), is considered causative for autosomal recessive Polycystic kidney disease.
This SNP is referred to as i5012612 by 23andMe.
| ClinVar | |
|---|---|
| Risk | rs137852949(G;G) Rs137852949(T;T) |
| Alt | rs137852949(G;G) Rs137852949(T;T) |
| Reference | Rs137852949(C;C) |
| Significance | Pathogenic |
| Disease | Autosomal recessive polycystic kidney disease |
| Variation | info |
| Gene | PKHD1 |
| CLNDBN | Autosomal recessive polycystic kidney disease |
| Reversed | 1 |
| HGVS | NC_000006.11:g.51923147G>A |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000004330.3, |
