rs137852949
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | carrier of an autosomal recessive polycystic kidney disease mutation |
(T;T) | 6 | Polycystic Kidney disease |
Reference | GRCh38 38.1/141 |
Chromosome | 6 |
Position | 52058349 |
Gene | PKHD1 |
is a | snp |
is | mentioned by |
dbSNP | rs137852949 |
dbSNP (classic) | rs137852949 |
ClinGen | rs137852949 |
ebi | rs137852949 |
HLI | rs137852949 |
Exac | rs137852949 |
Gnomad | rs137852949 |
Varsome | rs137852949 |
LitVar | rs137852949 |
Map | rs137852949 |
PheGenI | rs137852949 |
Biobank | rs137852949 |
1000 genomes | rs137852949 |
hgdp | rs137852949 |
ensembl | rs137852949 |
geneview | rs137852949 |
scholar | rs137852949 |
rs137852949 | |
pharmgkb | rs137852949 |
gwascentral | rs137852949 |
openSNP | rs137852949 |
23andMe | rs137852949 |
SNPshot | rs137852949 |
SNPdbe | rs137852949 |
MSV3d | rs137852949 |
GWAS Ctlg | rs137852949 |
Max Magnitude | 6 |
rs137852949, also known as c.1486C>T or p.Arg496Ter, is a SNP in the PKHD1 gene on chromosome 6.
The risk allele, rs199531851(T), is considered causative for autosomal recessive Polycystic kidney disease.
This SNP is referred to as i5012612 by 23andMe.
ClinVar | |
---|---|
Risk | rs137852949(G;G) Rs137852949(T;T) |
Alt | rs137852949(G;G) Rs137852949(T;T) |
Reference | Rs137852949(C;C) |
Significance | Pathogenic |
Disease | Autosomal recessive polycystic kidney disease |
Variation | info |
Gene | PKHD1 |
CLNDBN | Autosomal recessive polycystic kidney disease |
Reversed | 1 |
HGVS | NC_000006.11:g.51923147G>A |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000004330.3, |