rs137854431
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | Carrier of a mitochondrial depletion syndrome mutation |
(T;T) | 5 | TK-2 related mitochondrial depletion syndrome (myopathic) |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 66531432 |
Gene | TK2 |
is a | snp |
is | mentioned by |
dbSNP | rs137854431 |
dbSNP (classic) | rs137854431 |
ClinGen | rs137854431 |
ebi | rs137854431 |
HLI | rs137854431 |
Exac | rs137854431 |
Gnomad | rs137854431 |
Varsome | rs137854431 |
LitVar | rs137854431 |
Map | rs137854431 |
PheGenI | rs137854431 |
Biobank | rs137854431 |
1000 genomes | rs137854431 |
hgdp | rs137854431 |
ensembl | rs137854431 |
geneview | rs137854431 |
scholar | rs137854431 |
rs137854431 | |
pharmgkb | rs137854431 |
gwascentral | rs137854431 |
openSNP | rs137854431 |
23andMe | rs137854431 |
SNPshot | rs137854431 |
SNPdbe | rs137854431 |
MSV3d | rs137854431 |
GWAS Ctlg | rs137854431 |
Max Magnitude | 5 |
Reported as pathogenic in ClinVar for TK2 related mitochondrial depletion syndrome (myopathic form), a recessively inherited condition
ClinVar | |
---|---|
Risk | Rs137854431(T;T) |
Alt | Rs137854431(T;T) |
Reference | Rs137854431(C;C) |
Significance | Pathogenic |
Disease | Mitochondrial DNA depletion syndrome 2 not provided |
Variation | info |
Gene | TK2 |
CLNDBN | Mitochondrial DNA depletion syndrome 2 not provided |
Reversed | 1 |
HGVS | NC_000016.9:g.66565335G>A |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000013547.27, RCV000199738.2, |