rs139794067
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;G) | 6 | Familial hypertrophic cardiomyopathy (possible) |
| (G;G) | 0 | common in clinvar |
| Make rs139794067(A;A) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 3 |
| Position | 46860813 |
| Gene | MYL3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs139794067 |
| dbSNP (classic) | rs139794067 |
| ClinGen | rs139794067 |
| ebi | rs139794067 |
| HLI | rs139794067 |
| Exac | rs139794067 |
| Gnomad | rs139794067 |
| Varsome | rs139794067 |
| LitVar | rs139794067 |
| Map | rs139794067 |
| PheGenI | rs139794067 |
| Biobank | rs139794067 |
| 1000 genomes | rs139794067 |
| hgdp | rs139794067 |
| ensembl | rs139794067 |
| geneview | rs139794067 |
| scholar | rs139794067 |
| rs139794067 | |
| pharmgkb | rs139794067 |
| gwascentral | rs139794067 |
| openSNP | rs139794067 |
| 23andMe | rs139794067 |
| SNPshot | rs139794067 |
| SNPdbe | rs139794067 |
| MSV3d | rs139794067 |
| GWAS Ctlg | rs139794067 |
| Max Magnitude | 6 |
The rare minor allele of this variant is reported to be pathogenic/likely pathogenic for familial hypertrophic cardiomyopathy (HCM), according to [PMID 25611685
].
| ClinVar | |
|---|---|
| Risk | rs139794067(A;A) rs139794067(C;C) rs139794067(T;T) |
| Alt | rs139794067(A;A) rs139794067(C;C) rs139794067(T;T) |
| Reference | Rs139794067(G;G) |
| Significance | Pathogenic |
| Disease | not provided Primary familial hypertrophic cardiomyopathy Hypertrophic cardiomyopathy Cardiovascular phenotype not specified Cardiomyopathy |
| Variation | info |
| Gene | MYL3 |
| CLNDBN | not provided Primary familial hypertrophic cardiomyopathy Hypertrophic cardiomyopathy Cardiovascular phenotype not specified Cardiomyopathy |
| Reversed | 0 |
| HGVS | NC_000003.11:g.46902303G>C; NC_000003.11:g.46902303G>T |
| CLNSRC | Leiden Muscular Dystrophy pages (MYL3) |
| CLNACC | RCV000024471.3, RCV000151369.2, RCV000229595.2, RCV000243485.1, RCV000036019.2, RCV000157371.1, RCV000158937.2, RCV000238674.1, |
