rs140987490
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| (A;G) | 3 | carrier of a Friedreich's ataxia allele |
| (G;G) | 6 | Friedreich's ataxia |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 69064936 |
| Gene | FXN |
| is a | snp |
| is | mentioned by |
| dbSNP | rs140987490 |
| dbSNP (classic) | rs140987490 |
| ClinGen | rs140987490 |
| ebi | rs140987490 |
| HLI | rs140987490 |
| Exac | rs140987490 |
| Gnomad | rs140987490 |
| Varsome | rs140987490 |
| LitVar | rs140987490 |
| Map | rs140987490 |
| PheGenI | rs140987490 |
| Biobank | rs140987490 |
| 1000 genomes | rs140987490 |
| hgdp | rs140987490 |
| ensembl | rs140987490 |
| geneview | rs140987490 |
| scholar | rs140987490 |
| rs140987490 | |
| pharmgkb | rs140987490 |
| gwascentral | rs140987490 |
| openSNP | rs140987490 |
| 23andMe | rs140987490 |
| SNPshot | rs140987490 |
| SNPdbe | rs140987490 |
| MSV3d | rs140987490 |
| GWAS Ctlg | rs140987490 |
| Max Magnitude | 6 |
rs140987490, also known as c.384-2_A>G or , is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
| ClinVar | |
|---|---|
| Risk | Rs140987490(G;G) |
| Alt | Rs140987490(G;G) |
| Reference | Rs140987490(A;A) |
| Significance | Pathogenic |
| Disease | Friedreich's ataxia |
| Variation | info |
| Gene | FXN |
| CLNDBN | Friedreich's ataxia |
| Reversed | 0 |
| HGVS | NC_000009.11:g.71679852A>G |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000004187.3, |
[PMID 8596916] Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion.
