rs141935559
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 0 | common in clinvar |
(-;C) | 3 | carrier of a Friedreich's ataxia allele |
(C;C) | 6 | Friedreich's ataxia |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69035939 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs141935559 |
dbSNP (classic) | rs141935559 |
ClinGen | rs141935559 |
ebi | rs141935559 |
HLI | rs141935559 |
Exac | rs141935559 |
Gnomad | rs141935559 |
Varsome | rs141935559 |
LitVar | rs141935559 |
Map | rs141935559 |
PheGenI | rs141935559 |
Biobank | rs141935559 |
1000 genomes | rs141935559 |
hgdp | rs141935559 |
ensembl | rs141935559 |
geneview | rs141935559 |
scholar | rs141935559 |
rs141935559 | |
pharmgkb | rs141935559 |
gwascentral | rs141935559 |
openSNP | rs141935559 |
23andMe | rs141935559 |
SNPshot | rs141935559 |
SNPdbe | rs141935559 |
MSV3d | rs141935559 |
GWAS Ctlg | rs141935559 |
Max Magnitude | 6 |
rs141935559, also known as c.157 insC or p.R53PfsX40, is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | Rs141935559(C;C) |
Alt | Rs141935559(C;C) |
Reference | Rs141935559(;) |
Significance | Pathogenic |
Disease | Friedreich ataxia 1 |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich ataxia 1 |
Reversed | 0 |
HGVS | NC_000009.11:g.71650855dupC |
CLNSRC | |
CLNACC |
[PMID 9989622] Friedreich's ataxia: point mutations and clinical presentation of compound heterozygotes.