rs143396368
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 6 | Friedreich's ataxia |
| (C;G) | 3 | carrier of a Friedreich's ataxia allele |
| (G;G) | 0 | common in clinvar |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 69072623 |
| Gene | FXN |
| is a | snp |
| is | mentioned by |
| dbSNP | rs143396368 |
| dbSNP (classic) | rs143396368 |
| ClinGen | rs143396368 |
| ebi | rs143396368 |
| HLI | rs143396368 |
| Exac | rs143396368 |
| Gnomad | rs143396368 |
| Varsome | rs143396368 |
| LitVar | rs143396368 |
| Map | rs143396368 |
| PheGenI | rs143396368 |
| Biobank | rs143396368 |
| 1000 genomes | rs143396368 |
| hgdp | rs143396368 |
| ensembl | rs143396368 |
| geneview | rs143396368 |
| scholar | rs143396368 |
| rs143396368 | |
| pharmgkb | rs143396368 |
| gwascentral | rs143396368 |
| openSNP | rs143396368 |
| 23andMe | rs143396368 |
| SNPshot | rs143396368 |
| SNPdbe | rs143396368 |
| MSV3d | rs143396368 |
| GWAS Ctlg | rs143396368 |
| Max Magnitude | 6 |
rs143396368, also known as c.494 G>C or p.R165P (isof. 1) p.V168L (isof. 2), is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
| ClinVar | |
|---|---|
| Risk | Rs143396368(C;C) |
| Alt | Rs143396368(C;C) |
| Reference | Rs143396368(G;G) |
| Significance | Pathogenic |
| Disease | Friedreich ataxia 1 |
| Variation | info |
| Gene | FXN |
| CLNDBN | Friedreich ataxia 1 |
| Reversed | 0 |
| HGVS | NC_000009.11:g.71687539G>C |
| CLNSRC | |
| CLNACC | |
[PMID 10668723] Atypical Friedreich ataxia phenotype associated with a novel missense mutation in the X25 gene.
