rs143396368
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 6 | Friedreich's ataxia |
(C;G) | 3 | carrier of a Friedreich's ataxia allele |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69072623 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs143396368 |
dbSNP (classic) | rs143396368 |
ClinGen | rs143396368 |
ebi | rs143396368 |
HLI | rs143396368 |
Exac | rs143396368 |
Gnomad | rs143396368 |
Varsome | rs143396368 |
LitVar | rs143396368 |
Map | rs143396368 |
PheGenI | rs143396368 |
Biobank | rs143396368 |
1000 genomes | rs143396368 |
hgdp | rs143396368 |
ensembl | rs143396368 |
geneview | rs143396368 |
scholar | rs143396368 |
rs143396368 | |
pharmgkb | rs143396368 |
gwascentral | rs143396368 |
openSNP | rs143396368 |
23andMe | rs143396368 |
SNPshot | rs143396368 |
SNPdbe | rs143396368 |
MSV3d | rs143396368 |
GWAS Ctlg | rs143396368 |
Max Magnitude | 6 |
rs143396368, also known as c.494 G>C or p.R165P (isof. 1) p.V168L (isof. 2), is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | Rs143396368(C;C) |
Alt | Rs143396368(C;C) |
Reference | Rs143396368(G;G) |
Significance | Pathogenic |
Disease | Friedreich ataxia 1 |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich ataxia 1 |
Reversed | 0 |
HGVS | NC_000009.11:g.71687539G>C |
CLNSRC | |
CLNACC |
[PMID 10668723] Atypical Friedreich ataxia phenotype associated with a novel missense mutation in the X25 gene.