rs144143780
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 8 | Sanfilippo syndrome type A |
| (C;T) | 3 | Carrier for a Sanfilippo syndrome type A mutation |
| (T;T) | 0 | common/normal |
| Reference | GRCh38.p7 38.3/149 |
| Chromosome | 17 |
| Position | 80210822 |
| Gene | SGSH |
| is a | snp |
| is | mentioned by |
| dbSNP | rs144143780 |
| dbSNP (classic) | rs144143780 |
| ClinGen | rs144143780 |
| ebi | rs144143780 |
| HLI | rs144143780 |
| Exac | rs144143780 |
| Gnomad | rs144143780 |
| Varsome | rs144143780 |
| LitVar | rs144143780 |
| Map | rs144143780 |
| PheGenI | rs144143780 |
| Biobank | rs144143780 |
| 1000 genomes | rs144143780 |
| hgdp | rs144143780 |
| ensembl | rs144143780 |
| geneview | rs144143780 |
| scholar | rs144143780 |
| rs144143780 | |
| pharmgkb | rs144143780 |
| gwascentral | rs144143780 |
| openSNP | rs144143780 |
| 23andMe | rs144143780 |
| SNPshot | rs144143780 |
| SNPdbe | rs144143780 |
| MSV3d | rs144143780 |
| GWAS Ctlg | rs144143780 |
| Max Magnitude | 8 |
rs144143780, also known as c.1139A>G, p.Gln380Arg and Q380R, represents a rare mutation in the SGSH gene on chromosome 17.
Although still rare, the Q380R mutation is considered one of the most frequent pathogenic mutations associated with Sanfilippo syndrome type A, a recessively inherited disorder also known as mucopolysaccharidosis type IIIA (MPS3A).[PMID 21061399]
| ClinVar | |
|---|---|
| Risk | Rs144143780(C;C) |
| Alt | Rs144143780(C;C) |
| Reference | Rs144143780(T;T) |
| Significance | Pathogenic |
| Disease | not provided |
| Variation | info |
| Gene | SGSH |
| CLNDBN | not provided |
| Reversed | 0 |
| HGVS | NC_000017.10:g.78184621T>C |
| CLNSRC | |
| CLNACC | RCV000309724.1, |
