rs145999145
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 2 | 2x higher risk for Alzheimers disease |
(A;G) | 2 | 2x higher risk for Alzheimers disease |
(G;G) | 1 | common |
Reference | GRCh38 38.1/141 |
Chromosome | 19 |
Position | 40371688 |
Gene | PLD3 |
is a | snp |
is | mentioned by |
dbSNP | rs145999145 |
dbSNP (classic) | rs145999145 |
ClinGen | rs145999145 |
ebi | rs145999145 |
HLI | rs145999145 |
Exac | rs145999145 |
Gnomad | rs145999145 |
Varsome | rs145999145 |
LitVar | rs145999145 |
Map | rs145999145 |
PheGenI | rs145999145 |
Biobank | rs145999145 |
1000 genomes | rs145999145 |
hgdp | rs145999145 |
ensembl | rs145999145 |
geneview | rs145999145 |
scholar | rs145999145 |
rs145999145 | |
pharmgkb | rs145999145 |
gwascentral | rs145999145 |
openSNP | rs145999145 |
23andMe | rs145999145 |
SNPshot | rs145999145 |
SNPdbe | rs145999145 |
MSV3d | rs145999145 |
GWAS Ctlg | rs145999145 |
Max Magnitude | 2 |
rs145999145, also known as Val232Met or V232M, is a SNP in the phospholipase D family, member 3 PLD3 gene on chromosome 19. The rs145999145(G) allele encodes the Val; the (A) allele the Met.
A relatively rare variant in this SNP has been linked to a doubling of risk for Alzheimer's disease based on seven independent case-control series with a total of more than 11,000 cases and controls of European descent. Other rare variants in the PLD3 gene may also influence disease risk. [PMID 24336208]
ClinVar | |
---|---|
Risk | Rs145999145(A;A) |
Alt | Rs145999145(A;A) |
Reference | Rs145999145(G;G) |
Significance | Other |
Disease | Alzheimer disease 19 |
Variation | info |
Gene | PLD3 |
CLNDBN | Alzheimer disease 19 |
Reversed | 0 |
HGVS | NC_000019.9:g.40877595G>A |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000106322.4, |