rs145999145
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 2 | 2x higher risk for Alzheimers disease |
| (A;G) | 2 | 2x higher risk for Alzheimers disease |
| (G;G) | 1 | common |
| Reference | GRCh38 38.1/141 |
| Chromosome | 19 |
| Position | 40371688 |
| Gene | PLD3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs145999145 |
| dbSNP (classic) | rs145999145 |
| ClinGen | rs145999145 |
| ebi | rs145999145 |
| HLI | rs145999145 |
| Exac | rs145999145 |
| Gnomad | rs145999145 |
| Varsome | rs145999145 |
| LitVar | rs145999145 |
| Map | rs145999145 |
| PheGenI | rs145999145 |
| Biobank | rs145999145 |
| 1000 genomes | rs145999145 |
| hgdp | rs145999145 |
| ensembl | rs145999145 |
| geneview | rs145999145 |
| scholar | rs145999145 |
| rs145999145 | |
| pharmgkb | rs145999145 |
| gwascentral | rs145999145 |
| openSNP | rs145999145 |
| 23andMe | rs145999145 |
| SNPshot | rs145999145 |
| SNPdbe | rs145999145 |
| MSV3d | rs145999145 |
| GWAS Ctlg | rs145999145 |
| Max Magnitude | 2 |
rs145999145, also known as Val232Met or V232M, is a SNP in the phospholipase D family, member 3 PLD3 gene on chromosome 19. The rs145999145(G) allele encodes the Val; the (A) allele the Met.
A relatively rare variant in this SNP has been linked to a doubling of risk for Alzheimer's disease based on seven independent case-control series with a total of more than 11,000 cases and controls of European descent. Other rare variants in the PLD3 gene may also influence disease risk. [PMID 24336208
]
| ClinVar | |
|---|---|
| Risk | Rs145999145(A;A) |
| Alt | Rs145999145(A;A) |
| Reference | Rs145999145(G;G) |
| Significance | Other |
| Disease | Alzheimer disease 19 |
| Variation | info |
| Gene | PLD3 |
| CLNDBN | Alzheimer disease 19 |
| Reversed | 0 |
| HGVS | NC_000019.9:g.40877595G>A |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000106322.4, |
