rs147211454
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (;-) | 3 | carrier of a Friedreich's ataxia allele |
| (-;-) | 6 | Friedreich's ataxia |
| (GCAGACAAGCCAT;GCAGACAAGCCAT) | 0 | common in clinvar |
| Make rs147211454(-;GCAGACAAGCCAT) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 69053216 |
| Gene | FXN |
| is a | snp |
| is | mentioned by |
| dbSNP | rs147211454 |
| dbSNP (classic) | rs147211454 |
| ClinGen | rs147211454 |
| ebi | rs147211454 |
| HLI | rs147211454 |
| Exac | rs147211454 |
| Gnomad | rs147211454 |
| Varsome | rs147211454 |
| LitVar | rs147211454 |
| Map | rs147211454 |
| PheGenI | rs147211454 |
| Biobank | rs147211454 |
| 1000 genomes | rs147211454 |
| hgdp | rs147211454 |
| ensembl | rs147211454 |
| geneview | rs147211454 |
| scholar | rs147211454 |
| rs147211454 | |
| pharmgkb | rs147211454 |
| gwascentral | rs147211454 |
| openSNP | rs147211454 |
| 23andMe | rs147211454 |
| SNPshot | rs147211454 |
| SNPdbe | rs147211454 |
| MSV3d | rs147211454 |
| GWAS Ctlg | rs147211454 |
| Max Magnitude | 6 |
rs147211454, also known as c.340_352 del13 or p.A114TfsX15, is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
| ClinVar | |
|---|---|
| Risk | |
| Alt | |
| Reference | Rs147211454(GCAGACAAGCCAT;GCAGACAAGCCAT) |
| Significance | Pathogenic |
| Disease | Friedreich ataxia 1 |
| Variation | info |
| Gene | FXN |
| CLNDBN | Friedreich ataxia 1 |
| Reversed | 0 |
| HGVS | NC_000009.11:g.71668132_71668144delGCAGACAAGCCAT |
| CLNSRC | |
| CLNACC | |
[PMID 10633132
] Prevalence of mitochondrial gene mutations among hearing impaired patients.
