rs147211454
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(;-) | 3 | carrier of a Friedreich's ataxia allele |
(-;-) | 6 | Friedreich's ataxia |
(GCAGACAAGCCAT;GCAGACAAGCCAT) | 0 | common in clinvar |
Make rs147211454(-;GCAGACAAGCCAT) |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69053216 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs147211454 |
dbSNP (classic) | rs147211454 |
ClinGen | rs147211454 |
ebi | rs147211454 |
HLI | rs147211454 |
Exac | rs147211454 |
Gnomad | rs147211454 |
Varsome | rs147211454 |
LitVar | rs147211454 |
Map | rs147211454 |
PheGenI | rs147211454 |
Biobank | rs147211454 |
1000 genomes | rs147211454 |
hgdp | rs147211454 |
ensembl | rs147211454 |
geneview | rs147211454 |
scholar | rs147211454 |
rs147211454 | |
pharmgkb | rs147211454 |
gwascentral | rs147211454 |
openSNP | rs147211454 |
23andMe | rs147211454 |
SNPshot | rs147211454 |
SNPdbe | rs147211454 |
MSV3d | rs147211454 |
GWAS Ctlg | rs147211454 |
Max Magnitude | 6 |
rs147211454, also known as c.340_352 del13 or p.A114TfsX15, is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs147211454(GCAGACAAGCCAT;GCAGACAAGCCAT) |
Significance | Pathogenic |
Disease | Friedreich ataxia 1 |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich ataxia 1 |
Reversed | 0 |
HGVS | NC_000009.11:g.71668132_71668144delGCAGACAAGCCAT |
CLNSRC | |
CLNACC |
[PMID 10633132] Prevalence of mitochondrial gene mutations among hearing impaired patients.