rs147394623
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;G) | 3 | Carrier of a retinitis pigmentosa (RP) mutation |
(G;G) | 4.4 | Retinitis pigmentosa, type 59 |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 26438228 |
Gene | DHDDS |
is a | snp |
is | mentioned by |
dbSNP | rs147394623 |
dbSNP (classic) | rs147394623 |
ClinGen | rs147394623 |
ebi | rs147394623 |
HLI | rs147394623 |
Exac | rs147394623 |
Gnomad | rs147394623 |
Varsome | rs147394623 |
LitVar | rs147394623 |
Map | rs147394623 |
PheGenI | rs147394623 |
Biobank | rs147394623 |
1000 genomes | rs147394623 |
hgdp | rs147394623 |
ensembl | rs147394623 |
geneview | rs147394623 |
scholar | rs147394623 |
rs147394623 | |
pharmgkb | rs147394623 |
gwascentral | rs147394623 |
openSNP | rs147394623 |
23andMe | rs147394623 |
SNPshot | rs147394623 |
SNPdbe | rs147394623 |
MSV3d | rs147394623 |
GWAS Ctlg | rs147394623 |
Max Magnitude | 4.4 |
rs147394623, also known as c.124A>G, p.Lys42Glu and K42E, represents a rare mutation in the DHDDS gene on chromosome 1.
Inherited in an autosomal recessive manner, the rs147394623(G) allele is considered pathogenic for a form of retinitis pigmentosa (type 59 as labeled in OMIM).
This mutation is one of two considered to be a prevalent retinitis pigmentosa founder mutation among Ashkenazi Jews.[PMID 25255364]
ClinVar | |
---|---|
Risk | Rs147394623(G;G) |
Alt | Rs147394623(G;G) |
Reference | Rs147394623(A;A) |
Significance | Pathogenic |
Disease | Retinitis pigmentosa 59 |
Variation | info |
Gene | DHDDS |
CLNDBN | Retinitis pigmentosa 59 |
Reversed | 0 |
HGVS | NC_000001.10:g.26764719A>G |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000023687.3, |