rs17041183
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs17041183(A;A) |
| Make rs17041183(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 51002517 |
| Gene | NRXN1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17041183 |
| dbSNP (classic) | rs17041183 |
| ClinGen | rs17041183 |
| ebi | rs17041183 |
| HLI | rs17041183 |
| Exac | rs17041183 |
| Gnomad | rs17041183 |
| Varsome | rs17041183 |
| LitVar | rs17041183 |
| Map | rs17041183 |
| PheGenI | rs17041183 |
| Biobank | rs17041183 |
| 1000 genomes | rs17041183 |
| hgdp | rs17041183 |
| ensembl | rs17041183 |
| geneview | rs17041183 |
| scholar | rs17041183 |
| rs17041183 | |
| pharmgkb | rs17041183 |
| gwascentral | rs17041183 |
| openSNP | rs17041183 |
| 23andMe | rs17041183 |
| SNPshot | rs17041183 |
| SNPdbe | rs17041183 |
| MSV3d | rs17041183 |
| GWAS Ctlg | rs17041183 |
| GMAF | 0.186 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs17041183 | |
|---|---|
| PubMed | [PMID 17158188 ]
|
| Affy Probeset | SNP_A-2035789 |
| Affy Orientation | reverse |
| On GW 5.0 | |
| Alleles A/B | C/T |
| Ancestral | A |
| Population | Caucasian (USA, Australia) |
| Allele | G |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 2.09 |
| Disease | Substance dependence, Nicotine (SD-N) |
rs17041183 is in linkage disequilibrium with a polymorphism that increases susceptibility to Substance dependence, Nicotine 2.09 times for carriers of the G allele [PMID 17158188]
