rs17217772
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| Make rs17217772(A;G) |
| Make rs17217772(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 47410107 |
| Gene | MSH2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17217772 |
| dbSNP (classic) | rs17217772 |
| ClinGen | rs17217772 |
| ebi | rs17217772 |
| HLI | rs17217772 |
| Exac | rs17217772 |
| Gnomad | rs17217772 |
| Varsome | rs17217772 |
| LitVar | rs17217772 |
| Map | rs17217772 |
| PheGenI | rs17217772 |
| Biobank | rs17217772 |
| 1000 genomes | rs17217772 |
| hgdp | rs17217772 |
| ensembl | rs17217772 |
| geneview | rs17217772 |
| scholar | rs17217772 |
| rs17217772 | |
| pharmgkb | rs17217772 |
| gwascentral | rs17217772 |
| openSNP | rs17217772 |
| 23andMe | rs17217772 |
| SNPshot | rs17217772 |
| SNPdbe | rs17217772 |
| MSV3d | rs17217772 |
| GWAS Ctlg | rs17217772 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 25134804
] Gly322Asp and Asn127Ser single nucleotide polymorphisms (SNPs) of hMSH2 mismatch repair gene and the risk of triple-negative breast cancer in Polish women
| ClinVar | |
|---|---|
| Risk | rs17217772(G;G) rs17217772(T;T) |
| Alt | rs17217772(G;G) rs17217772(T;T) |
| Reference | Rs17217772(A;A) |
| Significance | Non-pathogenic |
| Disease | Lynch syndrome not specified Lynch syndrome I Hereditary cancer-predisposing syndrome |
| Variation | info |
| Gene | MSH2 |
| CLNDBN | Lynch syndrome not specified Lynch syndrome I Hereditary cancer-predisposing syndrome |
| Reversed | 0 |
| HGVS | NC_000002.11:g.47637246A>G; NC_000002.11:g.47637246A>T |
| CLNSRC | HGMD UniProtKB (protein) |
| CLNACC | RCV000030253.4, RCV000035361.8, RCV000144619.1, RCV000162398.1, RCV000076589.2, |
