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rs17445836

From SNPedia

Orientationplus
Stabilizedplus
Make rs17445836(A;A)
Make rs17445836(A;G)
Make rs17445836(G;G)
ReferenceGRCh38 38.1/141
Chromosome16
Position85984057
is asnp
is mentioned by
dbSNPrs17445836
dbSNP (classic)rs17445836
ClinGenrs17445836
ebirs17445836
HLIrs17445836
Exacrs17445836
Gnomadrs17445836
Varsomers17445836
LitVarrs17445836
Maprs17445836
PheGenIrs17445836
Biobankrs17445836
1000 genomesrs17445836
hgdprs17445836
ensemblrs17445836
geneviewrs17445836
scholarrs17445836
googlers17445836
pharmgkbrs17445836
gwascentralrs17445836
openSNPrs17445836
23andMers17445836
SNPshotrs17445836
SNPdbers17445836
MSV3drs17445836
GWAS Ctlgrs17445836
GMAF0.1281
Max Magnitude0
? (A;A) (A;G) (G;G) 28


rs17445836 is a SNP in the region of the IRF8 gene.

A large study (~5,000 patients) found an increased risk for multiple sclerosis associated with rs17445836; the odds ratio for the minor allele was reported as 0.80 (CI: 0.72-0.89, p=3.73x10(-9)).10.1038/ng.401

GWAS snp
PMID [PMID 19525953OA-icon.png]
Trait Multiple sclerosis
Title Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci
Risk Allele G
P-val 4E-9
Odds Ratio 1.25 [1.12-1.39]
OMIM126200
Desc
Variant
Relatedalso


[PMID 20405052OA-icon.png] The effect of single nucleotide polymorphisms from genome wide association studies in multiple sclerosis on gene expression.



[PMID 23965942OA-icon.png] Genetic variation near IRF8 is associated with serologic and cytokine profiles in systemic lupus erythematosus and multiple sclerosis


[PMID 25989711] Association of IRF8 gene polymorphisms with autoimmune thyroid disease