rs17577
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| Make rs17577(A;A) |
| Make rs17577(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 20 |
| Position | 46014472 |
| Gene | MMP9 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17577 |
| dbSNP (classic) | rs17577 |
| ClinGen | rs17577 |
| ebi | rs17577 |
| HLI | rs17577 |
| Exac | rs17577 |
| Gnomad | rs17577 |
| Varsome | rs17577 |
| LitVar | rs17577 |
| Map | rs17577 |
| PheGenI | rs17577 |
| Biobank | rs17577 |
| 1000 genomes | rs17577 |
| hgdp | rs17577 |
| ensembl | rs17577 |
| geneview | rs17577 |
| scholar | rs17577 |
| rs17577 | |
| pharmgkb | rs17577 |
| gwascentral | rs17577 |
| openSNP | rs17577 |
| 23andMe | rs17577 |
| SNPshot | rs17577 |
| SNPdbe | rs17577 |
| MSV3d | rs17577 |
| GWAS Ctlg | rs17577 |
| Merged from | Rs2274756 |
| GMAF | 0.163 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 22142952] Personality traits and the R668Q polymorphism located in the MMP-9 gene
[PMID 22621753] Higher risk of matrix metalloproteinase (MMP-2, 7, 9) and tissue inhibitor of metalloproteinase (TIMP-2) genetic variants to gallbladder cancer
[PMID 22664146] Association of matrix metalloproteinases (MMP2, MMP7 and MMP9) genetic variants with left ventricular dysfunction in coronary artery disease patients[PMID 15748780] Genetic association between matrix metalloproteinase MMP-9 and MMP-3 polymorphisms and Japanese sporadic Alzheimer's disease.
[PMID 17346338
] Matrix Metalloproteinase-9 (MMP-9) polymorphisms in patients with cutaneous malignant melanoma.
[PMID 18191955] Correlating observed odds ratios from lung cancer case-control studies to SNP functional scores predicted by bioinformatic tools.
[PMID 18303200] Matrix metalloproteinase-3 genotypes influence recovery from hepatitis B virus infection.
[PMID 18636124] Polymorphisms in the estrogen receptor 1 and vitamin C and matrix metalloproteinase gene families are associated with susceptibility to lymphoma.
[PMID 19064570] Missense polymorphisms in matrix metalloproteinase genes and skin cancer risk.
[PMID 20078883] Association of MMP-2 polymorphisms with severe and very severe COPD: a case control study of MMPs-1, 9 and 12 in a European population.
[PMID 20181264] MMP-9 gene variants increase the risk for non-atopic asthma in children.
[PMID 20184534] Association of matrix metalloproteinase 9 genotypes and cardiovascular disease risk factors with serum matrix metalloproteinase 9 concentrations in Taiwanese individuals.
[PMID 20529372] Matrix metalloproteinase-9 gene polymorphisms in nasal polyposis.
[PMID 20725776] MMP9 polymorphisms and breast cancer risk: a report from the Shanghai Breast Cancer Genetics Study.
[PMID 22107133] Elevated plasma matrix metalloproteinase-9 protein and its gene polymorphism in patients with community-acquired pneumonia.
[PMID 22388798] Gene panels to help identify subgroups at high and low risk of coronary heart disease among those randomized to antihypertensive treatment: the GenHAT study.
[PMID 23570558] The Influence of Functional Polymorphisms in Matrix Metalloproteinase 9 on Survival of Breast Cancer Patients in a Chinese Population
[PMID 23639553] Polymorphisms in Metalloproteinase-9 are Associated with the risk for Asthma in Mexican Pediatric Patients
[PMID 24967180] The association between matrix metalloprotease-9 gene polymorphisms and primary angle-closure glaucoma in a Chinese Han population
| ClinVar | |
|---|---|
| Risk | rs17577(A;A) rs17577(C;C) |
| Alt | rs17577(A;A) rs17577(C;C) |
| Reference | Rs17577(G;G) |
| Significance | Non-pathogenic |
| Disease | Metaphyseal anadysplasia |
| Variation | info |
| Gene | MMP9 |
| CLNDBN | Metaphyseal anadysplasia |
| Reversed | 0 |
| HGVS | NC_000020.10:g.44643111G>A |
| CLNSRC | |
| CLNACC | RCV000271562.1, |
[PMID 29581776] Association of Smoking and XPG, CYP1A1, OGG1, ERCC5, ERCC1, MMP2, and MMP9 Gene Polymorphisms with the early detection and occurrence of Laryngeal Squamous Carcinoma.
[PMID 33351325] [Gene-environment interactions between polymorphic loci of MMPs and obesity in essential hypertension in women.]
