rs17646946
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 2.5 | straighter curl |
| (G;G) | 0 |
| Make rs17646946(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 152090291 |
| Gene | TCHHL1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17646946 |
| dbSNP (classic) | rs17646946 |
| ClinGen | rs17646946 |
| ebi | rs17646946 |
| HLI | rs17646946 |
| Exac | rs17646946 |
| Gnomad | rs17646946 |
| Varsome | rs17646946 |
| LitVar | rs17646946 |
| Map | rs17646946 |
| PheGenI | rs17646946 |
| Biobank | rs17646946 |
| 1000 genomes | rs17646946 |
| hgdp | rs17646946 |
| ensembl | rs17646946 |
| geneview | rs17646946 |
| scholar | rs17646946 |
| rs17646946 | |
| pharmgkb | rs17646946 |
| gwascentral | rs17646946 |
| openSNP | rs17646946 |
| 23andMe | rs17646946 |
| SNPshot | rs17646946 |
| SNPdbe | rs17646946 |
| MSV3d | rs17646946 |
| GWAS Ctlg | rs17646946 |
| GMAF | 0.1368 |
| Max Magnitude | 2.5 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
rs17646946 is a SNP on chromosome 1 that is apparently part of the trichohyalin-like 1 TCHHL1 gene. Trichohyalin is a protein found in hair follicle roots.
In an interesting example of people-powered research, this SNP and one other were reported to be associated with hair curliness. Source:
[PMID 19896111
] hair curl rs17646946 and rs7349332. source genetic future
rs17646946 and hair curl with each A conferring a reduction in curliness of about 0.29 points on a scale from 0 to 5.
See also: rs11803731
| GWAS snp | |
|---|---|
| PMID | [PMID 20585627 |
| Trait | Common traits (Other) |
| Title | Web-based, participant-driven studies yield novel genetic associations for common traits |
| Risk Allele | A |
| P-val | 2E-42 |
| Odds Ratio | 0.29 [NR] unit decrease |
