rs17883192
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | >3x risk | |
| (C;G) | 3x risk | |
| (G;G) | common |
| Reference | GRCh38 38.1/141 |
| Chromosome | X |
| Position | 1352649 |
| Gene | IL3RA, LOC101928055 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17883192 |
| dbSNP (classic) | rs17883192 |
| ClinGen | rs17883192 |
| ebi | rs17883192 |
| HLI | rs17883192 |
| Exac | rs17883192 |
| Gnomad | rs17883192 |
| Varsome | rs17883192 |
| LitVar | rs17883192 |
| Map | rs17883192 |
| PheGenI | rs17883192 |
| Biobank | rs17883192 |
| 1000 genomes | rs17883192 |
| hgdp | rs17883192 |
| ensembl | rs17883192 |
| geneview | rs17883192 |
| scholar | rs17883192 |
| rs17883192 | |
| pharmgkb | rs17883192 |
| gwascentral | rs17883192 |
| openSNP | rs17883192 |
| 23andMe | rs17883192 |
| SNPshot | rs17883192 |
| SNPdbe | rs17883192 |
| MSV3d | rs17883192 |
| GWAS Ctlg | rs17883192 |
| GMAF | 0.3039 |
| Max Magnitude | 0 |
rs17883192, part of a haplotype block spanning introns 4, 5 and 6 of the IL3RA gene, has been reported in a whole genome association study to be associated with schizophrenia. (The other SNPs in this block are rs6422441 and rs6603272.)
The risk allele (oriented to the dbSNP entry) is (C); the odds ratio associated with this allele is 3.07. [PMID 17522711]
